RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ZNF470Q6ECI4 717 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 DUS1LQ6P1R4 473 aaKnown RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 TLDC1Q6P9B6 456 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 IYDQ6PHW0 289 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 CNSTQ6PJW8 725 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 ABRAXAS1Q6UWZ7 409 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 PACS1Q6VY07 963 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 CAPN12Q6ZSI9 719 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 CHST15Q7LFX5 561 aaPredicted RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 EFL1Q7Z2Z2 1120 aaKnown RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 CLEC14AQ86T13 490 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 PIM3Q86V86 326 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 LRRTM4Q86VH4 590 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 LCA5Q86VQ0 697 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 KCNMB4Q86W47 210 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 SLC26A11Q86WA9 606 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 LRRC6Q86X45 466 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 ZNF761Q86XN6 746 aaPredicted RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 PLXDC1Q8IUK5 500 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 CILP2Q8IUL8 1156 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 VRK3Q8IV63 474 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 CNTN4Q8IWV2 1026 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 ZBED8Q8IZ13 594 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 ANKRD42Q8N9B4 389 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 BANPQ8N9N5 519 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 C2CD4AQ8NCU7 369 aaPredicted RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 PPFIBP2Q8ND30 876 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 ACVR1CQ8NER5 493 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 OR4D9Q8NGE8 314 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 GABPB2Q8TAK5 448 aaPredicted RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 ZDHHC1Q8WTX9 485 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 SREK1Q8WXA9 508 aaKnown RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 NSL1Q96IY1 281 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 RMDN2Q96LZ7 410 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 C7orf26Q96N11 449 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 SLC46A1Q96NT5 459 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 INSM2Q96T92 566 aaPredicted RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 CCDC3Q9BQI4 270 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 BTBD10Q9BSF8 475 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 CCM2Q9BSQ5 444 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 MCMBPQ9BTE3 642 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 EFHD1Q9BUP0 239 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 IQCGQ9H095 443 aaKnown RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 OR52A5Q9H2C5 316 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 VCXQ9H320 206 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 TRIT1Q9H3H1 467 aaKnown RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 SYTL2Q9HCH5 934 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 FBXO6Q9NRD1 293 aaPredicted RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 IARS2Q9NSE4 1012 aaKnown RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 C20orf96Q9NUD7 363 aaPredicted RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 POT1Q9NUX5 634 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 KCNK4Q9NYG8 393 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 MOCS1Q9NZB8 636 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 ZNF624Q9P2J8 865 aaPredicted RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 LRIT1Q9P2V4 623 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 STOML1Q9UBI4 398 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 EPHA6Q9UF33 1036 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 ZC3H7BQ9UGR2 993 aaKnown RBP5.12□□□□□ -1.59
SHMT1-211ENST00000618902 KLK13Q9UKR3 277 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 FBXO5Q9UKT4 447 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 ZMIZ1Q9ULJ6 1067 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 PSMD13Q9UNM6 376 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 CDYLQ9Y232 598 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 PCDHGA3Q9Y5H0 932 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 RNF215Q9Y6U7 377 aa5.12□□□□□ -1.59
SHMT1-211ENST00000618902 SNRNP200O75643 2136 aaKnown RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 A0A1W2PQM1 296 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 TCRBV9S1A1TA0A576 114 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 SLC5A10A0PJK1 596 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CPED1A4D0V7 1026 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 KRT87PA6NCN2 255 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 FAM159BA6NKW6 160 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CDRT15L2A8MXV6 281 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 B4E171 279 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 POC1B-GALNT4F8VUJ3 575 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 PRMT5O14744 637 aaPredicted RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 PLD2O14939 933 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 KPNA5O15131 536 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 DUX1O43812 170 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 GPC4O75487 556 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 NDUFS3O75489 264 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 KLHL2O95198 593 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 RECKO95980 971 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 AHSGP02765 367 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 POLBP06746 335 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 ANKRD34CP0C6C1 535 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 MSL3P1P0C860 447 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 DHRS4L1P0CG22 281 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 TPBGLP0DKB5 382 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 ACADSP16219 412 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 OGNP20774 298 aaKnown RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 IDSP22304 550 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 RPS3P23396 243 aaKnown RBP eCLIP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 GRK2P25098 689 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 RPL10P27635 214 aaKnown RBP5.11□□□□□ -1.59
SHMT1-211ENST00000618902 AOAHP28039 575 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 ACADLP28330 430 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 FMO4P31512 558 aa5.11□□□□□ -1.59
SHMT1-211ENST00000618902 CRHR1P34998 444 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms