RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 KLHL10Q6JEL2 608 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 ZNF449Q6P9G9 518 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 TMEM220Q6QAJ8 160 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 KDELC1Q6UW63 502 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 CA5BP1Q8WTZ4 195 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 ZUFSPQ96AP4 578 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 OLFM3Q96PB7 478 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 PPP1R2P1Q96PQ5 205 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 MDFIQ99750 246 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 TRIM51Q9BSJ1 452 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 GSX1Q9H4S2 264 aaPredicted RBP4.37□□□□□ -1.71
SNCA-213ENST00000618500 MMP25Q9NPA2 562 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 MKKSQ9NPJ1 570 aaPredicted RBP4.37□□□□□ -1.71
SNCA-213ENST00000618500 CUTCQ9NTM9 273 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 IMP3Q9NV31 184 aaKnown RBP4.37□□□□□ -1.71
SNCA-213ENST00000618500 DNAJB12Q9NXW2 375 aaKnown RBP4.37□□□□□ -1.71
SNCA-213ENST00000618500 DTLQ9NZJ0 730 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 PIKFYVEQ9Y2I7 2098 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 CENPEQ02224 2701 aa4.37□□□□□ -1.71
SNCA-213ENST00000618500 ARHGAP21Q5T5U3 1957 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 OR14I1A6ND48 311 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 SYNDIG1LA6NDD5 238 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 H7C0S8 307 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 RASGRF2O14827 1237 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 WDPCPO95876 746 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 INHBBP09529 407 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 RALBP11234 206 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 MSH3P20585 1137 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 ACADLP28330 430 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 SLC26A3P40879 764 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 SORDQ00796 357 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 TUBA3CQ13748 450 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 SYCP1Q15431 976 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 BBS9Q3SYG4 887 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 GPR33Q49SQ1 333 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 PRAMEF17Q5VTA0 474 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 MLIPQ5VWP3 458 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 TXNRD3NBQ6F5E7 133 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 TUBA3EQ6PEY2 450 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 RGS9BPQ6ZS82 235 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 CAPN12Q6ZSI9 719 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 MARVELD2Q8N4S9 558 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 DNAAF3Q8N9W5 541 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 PHC3Q8NDX5 983 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 OR5K2Q8NHB8 316 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 C16orf52Q8NHV5 167 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 BRIX1Q8TDN6 353 aaKnown RBP4.36□□□□□ -1.71
SNCA-213ENST00000618500 ERGIC2Q96RQ1 377 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 MENTQ9BUN1 341 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 GPR63Q9BZJ6 419 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 ISCUQ9H1K1 167 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 ZNF160Q9HCG1 818 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 FAM60AQ9NP50 221 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 B4GALT7Q9UBV7 327 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 ZNF282Q9UDV7 671 aaPredicted RBP4.36□□□□□ -1.71
SNCA-213ENST00000618500 CDC14AQ9UNH5 594 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 CSMD1Q96PZ7 3565 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 CELSR1Q9NYQ6 3014 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 SPTBN1Q01082 2364 aaKnown RBP4.36□□□□□ -1.71
SNCA-213ENST00000618500 CREBBPQ92793 2442 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 IFRD1O00458 451 aaPredicted RBP4.36□□□□□ -1.71
SNCA-213ENST00000618500 ZGLP1P0C6A0 271 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 IL10P22301 178 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 IL1R2P27930 398 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 PEBP1P30086 187 aaKnown RBP4.36□□□□□ -1.71
SNCA-213ENST00000618500 LMAN1P49257 510 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 STX17P56962 302 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 MEF2AQ02078 507 aaPredicted RBP4.36□□□□□ -1.71
SNCA-213ENST00000618500 SRSF11Q05519 484 aaKnown RBP4.36□□□□□ -1.71
SNCA-213ENST00000618500 DPYSL3Q14195 570 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 MEP1AQ16819 746 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 PRTGQ2VWP7 1150 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 RIPPLY2Q5TAB7 128 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 FAM69BQ5VUD6 431 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 SLC9A4Q6AI14 798 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 CNSTQ6PJW8 725 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 CLEC9AQ6UXN8 241 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 UNC5DQ6UXZ4 953 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 TAOK1Q7L7X3 1001 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 NT5DC3Q86UY8 548 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 OR2L8Q8NGY9 312 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 ZNF830Q96NB3 372 aaPredicted RBP4.36□□□□□ -1.71
SNCA-213ENST00000618500 SMIM14Q96QK8 99 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 KCNJ16Q9NPI9 418 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 CCM2LQ9NUG4 571 aaPredicted RBP4.36□□□□□ -1.71
SNCA-213ENST00000618500 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.36□□□□□ -1.71
SNCA-213ENST00000618500 IP6K2Q9UHH9 426 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 TINAGQ9UJW2 476 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 DNAJC16Q9Y2G8 782 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 ALG6Q9Y672 507 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 CCDC88CQ9P219 2028 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 ANKRD12Q6UB98 2062 aa4.36□□□□□ -1.71
SNCA-213ENST00000618500 A6NNC1 897 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 F8W8V4 182 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 BCKDKO14874 412 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 ASNA1O43681 348 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 SLCO2B1O94956 709 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 SNRPB2P08579 225 aaKnown RBP4.35□□□□□ -1.71
SNCA-213ENST00000618500 RARAP10276 462 aa4.35□□□□□ -1.71
SNCA-213ENST00000618500 ZFXP17010 805 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms