RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 CADM1Q9BY67 442 aaKnown RBP12.52□□□□□ -0.41
CCL4-201ENST00000613947 STN1Q9H668 368 aaKnown RBP12.52□□□□□ -0.41
CCL4-201ENST00000613947 SMYD2Q9NRG4 433 aa12.52□□□□□ -0.41
CCL4-201ENST00000613947 GALPQ9UBC7 116 aa12.52□□□□□ -0.41
CCL4-201ENST00000613947 TMCO1Q9UM00 188 aa12.52□□□□□ -0.41
CCL4-201ENST00000613947 CDYLQ9Y232 598 aa12.52□□□□□ -0.41
CCL4-201ENST00000613947 MED16Q9Y2X0 877 aa12.52□□□□□ -0.41
CCL4-201ENST00000613947 PSAT1Q9Y617 370 aa12.52□□□□□ -0.41
CCL4-201ENST00000613947 LAMA5O15230 3695 aa12.52□□□□□ -0.41
CCL4-201ENST00000613947 A0A1W2PQM1 296 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 GSC2O15499 205 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 GPC4O75487 556 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 TGDSO95455 350 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 RPLP0P05388 317 aaKnown RBP12.51□□□□□ -0.41
CCL4-201ENST00000613947 PIM1P11309 404 aaPredicted RBP12.51□□□□□ -0.41
CCL4-201ENST00000613947 MTHFD1P11586 935 aaKnown RBP12.51□□□□□ -0.41
CCL4-201ENST00000613947 GPR3P46089 330 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 PLOD1Q02809 727 aaPredicted RBP12.51□□□□□ -0.41
CCL4-201ENST00000613947 FOXC1Q12948 553 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 AMZ1Q400G9 498 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 TAF1BQ53T94 588 aaPredicted RBP12.51□□□□□ -0.41
CCL4-201ENST00000613947 DUS1LQ6P1R4 473 aaKnown RBP12.51□□□□□ -0.41
CCL4-201ENST00000613947 ZNF449Q6P9G9 518 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 FAM47EQ6ZV65 393 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 CYS1Q717R9 158 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 OTOAQ7RTW8 1153 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 SPNS2Q8IVW8 549 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 LZICQ8WZA0 190 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 PTCD3Q96EY7 689 aaKnown RBP12.51□□□□□ -0.41
CCL4-201ENST00000613947 NSL1Q96IY1 281 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 SMC6Q96SB8 1091 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 CCDC68Q9H2F9 335 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 POT1Q9NUX5 634 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 ANGPTL2Q9UKU9 493 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 COMMD3-BMI1R4GMX3 469 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 ACACBO00763 2458 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 IGF2RP11717 2491 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 CXorf49A8MYA2 514 aaPredicted RBP12.51□□□□□ -0.41
CCL4-201ENST00000613947 E5RI56 91 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 IFRD1O00458 451 aaPredicted RBP12.51□□□□□ -0.41
CCL4-201ENST00000613947 NTN3O00634 580 aaPredicted RBP12.51□□□□□ -0.41
CCL4-201ENST00000613947 HYAL3O43820 417 aaPredicted RBP12.51□□□□□ -0.41
CCL4-201ENST00000613947 SLCO2B1O94956 709 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 C1QAP02745 245 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 APOA4P06727 396 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 ADRB1P08588 477 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 ACADLP28330 430 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 RAP1GDS1P52306 607 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 GPR18Q14330 331 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 HES3Q5TGS1 186 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 NKAIN2Q5VXU1 208 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 FOXB2Q5VYV0 432 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 TMEM26Q6ZUK4 368 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 GALNT7Q86SF2 657 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 PDZD3Q86UT5 571 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 MARCH9Q86YJ5 346 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 AVL9Q8NBF6 648 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 PHC3Q8NDX5 983 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 SH3KBP1Q96B97 665 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 NDNQ99608 321 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 ZNF184Q99676 751 aaPredicted RBP12.51□□□□□ -0.41
CCL4-201ENST00000613947 AARSD1Q9BTE6 412 aaKnown RBP12.51□□□□□ -0.41
CCL4-201ENST00000613947 LRRN3Q9H3W5 708 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 SYNDIG1Q9H7V2 258 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 PCMTD2Q9NV79 361 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 KCNK4Q9NYG8 393 aa12.51□□□□□ -0.41
CCL4-201ENST00000613947 PTPRBP23467 1997 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 IGHV1OR21-1A0A087WYE8 117 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 MED19A0JLT2 244 aaPredicted RBP12.5□□□□□ -0.41
CCL4-201ENST00000613947 TYROBPO43914 113 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 CBX6O95503 412 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 CD1CP29017 333 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 CD151P48509 253 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 CLCN7P51798 805 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 POLE2P56282 527 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 RCN1Q15293 331 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 RBM20Q5T481 1227 aaKnown RBP12.5□□□□□ -0.41
CCL4-201ENST00000613947 USP53Q70EK8 1073 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 ERMP1Q7Z2K6 904 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 STRA8Q7Z7C7 330 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 SLC22A15Q8IZD6 547 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 ZNF75CPQ92670 426 aaPredicted RBP12.5□□□□□ -0.41
CCL4-201ENST00000613947 TFGQ92734 400 aaPredicted RBP12.5□□□□□ -0.41
CCL4-201ENST00000613947 KCNJ9Q92806 393 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 ALKBH8Q96BT7 664 aaKnown RBP12.5□□□□□ -0.41
CCL4-201ENST00000613947 SLC30A3Q99726 388 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 MIPEPQ99797 713 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 PAIP2Q9BPZ3 127 aaKnown RBP12.5□□□□□ -0.41
CCL4-201ENST00000613947 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.5□□□□□ -0.41
CCL4-201ENST00000613947 UCK1Q9HA47 277 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 RDH14Q9HBH5 336 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 LATS2Q9NRM7 1088 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 IRAK4Q9NWZ3 460 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 CHCHD3Q9NX63 227 aaKnown RBP12.5□□□□□ -0.41
CCL4-201ENST00000613947 NDUFA13Q9P0J0 144 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 ATXN7L1Q9ULK2 861 aaPredicted RBP12.5□□□□□ -0.41
CCL4-201ENST00000613947 WASF3Q9UPY6 502 aa12.5□□□□□ -0.41
CCL4-201ENST00000613947 MTO1Q9Y2Z2 717 aaKnown RBP12.5□□□□□ -0.41
CCL4-201ENST00000613947 FAM149AA5PLN7 773 aa12.49□□□□□ -0.41
CCL4-201ENST00000613947 FAM159BA6NKW6 160 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms