RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 CCDC89Q8N998 374 aa17.32■□□□□ 0.36
H3F3B-209ENST00000589949 SMAD5Q99717 465 aaKnown RBP17.32■□□□□ 0.36
H3F3B-209ENST00000589949 DHRS4Q9BTZ2 278 aa17.32■□□□□ 0.36
H3F3B-209ENST00000589949 CATSPERZQ9NTU4 200 aa17.32■□□□□ 0.36
H3F3B-209ENST00000589949 PLCL2Q9UPR0 1127 aa17.32■□□□□ 0.36
H3F3B-209ENST00000589949 RUVBL2Q9Y230 463 aaKnown RBP17.32■□□□□ 0.36
H3F3B-209ENST00000589949 ZNF451Q9Y4E5 1061 aa17.32■□□□□ 0.36
H3F3B-209ENST00000589949 NFS1Q9Y697 457 aa17.32■□□□□ 0.36
H3F3B-209ENST00000589949 TCRBV7S3A2A0A539 114 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 CD3EAPO15446 510 aaKnown RBP17.31■□□□□ 0.36
H3F3B-209ENST00000589949 PRICKLE3O43900 615 aaPredicted RBP17.31■□□□□ 0.36
H3F3B-209ENST00000589949 MCM3P25205 808 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 KCNJ1P48048 391 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 SSPNQ14714 243 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 RPS6KA1Q15418 735 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 NKAIN1Q4KMZ8 207 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 SLC6A19Q695T7 634 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 CES3Q6UWW8 571 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 NLRP9Q7RTR0 991 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 PPP1R32Q7Z5V6 425 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 MCATQ8IVS2 390 aaKnown RBP17.31■□□□□ 0.36
H3F3B-209ENST00000589949 DCUN1D3Q8IWE4 304 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 PPHLN1Q8NEY8 458 aaKnown RBP17.31■□□□□ 0.36
H3F3B-209ENST00000589949 OR2L8Q8NGY9 312 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 PROKR1Q8TCW9 393 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 ASZ1Q8WWH4 475 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 PEX13Q92968 403 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 TTC1Q99614 292 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 GPR83Q9NYM4 423 aa17.31■□□□□ 0.36
H3F3B-209ENST00000589949 IFT80Q9P2H3 777 aaPredicted RBP17.31■□□□□ 0.36
H3F3B-209ENST00000589949 BLACEA4D250 179 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 PRMT5O14744 637 aaPredicted RBP17.3■□□□□ 0.36
H3F3B-209ENST00000589949 NRP2O60462 931 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 APOA4P06727 396 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 RNF224P0DH78 156 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 INPP5JQ15735 1006 aaPredicted RBP17.3■□□□□ 0.36
H3F3B-209ENST00000589949 CTSL3PQ5NE16 218 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 DCAF10Q5QP82 559 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 TLDC1Q6P9B6 456 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 DRICH1Q6PGQ1 229 aaPredicted RBP17.3■□□□□ 0.36
H3F3B-209ENST00000589949 UNC5DQ6UXZ4 953 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 RAB43Q86YS6 212 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 GALNT11Q8NCW6 608 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 OR2Y1Q8NGV0 311 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.3■□□□□ 0.36
H3F3B-209ENST00000589949 MFSD3Q96ES6 412 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 TSGA10Q9BZW7 698 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 EIF2B3Q9NR50 452 aaKnown RBP17.3■□□□□ 0.36
H3F3B-209ENST00000589949 DRG1Q9Y295 367 aaKnown RBP17.3■□□□□ 0.36
H3F3B-209ENST00000589949 PADI2Q9Y2J8 665 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 PCDHGB7Q9Y5F8 929 aa17.3■□□□□ 0.36
H3F3B-209ENST00000589949 RASGRF2O14827 1237 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 KRT86O43790 486 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 CTSVO60911 334 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 VPS4BO75351 444 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 MED26O95402 600 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 MGAT1P26572 445 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 PSMB5P28074 263 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 FOLR3P41439 243 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 BDKRB1P46663 353 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 RRADP55042 308 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 YBX1P67809 324 aaKnown RBP17.29■□□□□ 0.36
H3F3B-209ENST00000589949 PLEKHN1Q494U1 663 aaPredicted RBP17.29■□□□□ 0.36
H3F3B-209ENST00000589949 HIST2H2BCQ6DN03 193 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 FIGLAQ6QHK4 219 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 COX15Q7KZN9 410 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 DENND1AQ8TEH3 1009 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 ANP32BQ92688 251 aaKnown RBP17.29■□□□□ 0.36
H3F3B-209ENST00000589949 C19orf60Q96EN9 201 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 BIRC8Q96P09 236 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 TRIM56Q9BRZ2 755 aaKnown RBP17.29■□□□□ 0.36
H3F3B-209ENST00000589949 NDC1Q9BTX1 674 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 ZBTB20Q9HC78 741 aaPredicted RBP17.29■□□□□ 0.36
H3F3B-209ENST00000589949 IRAK4Q9NWZ3 460 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 SYBUQ9NX95 663 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 P4HTMQ9NXG6 502 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 GALPQ9UBC7 116 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 VPS4AQ9UN37 437 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 SRPK3Q9UPE1 567 aa17.29■□□□□ 0.36
H3F3B-209ENST00000589949 TCP11X1B4DZS4 312 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 GOLGA8KD6RF30 607 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 GOLGA8TH3BQL2 631 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 DPM1O60762 260 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 SEMA7AO75326 666 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 C1orf105O95561 183 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 FGGP02679 453 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 GP1BBP13224 206 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 ALAS2P22557 587 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 DEKP35659 375 aaKnown RBP17.28■□□□□ 0.36
H3F3B-209ENST00000589949 TTPAP49638 278 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 BASP1P80723 227 aaKnown RBP17.28■□□□□ 0.36
H3F3B-209ENST00000589949 AARS2Q5JTZ9 985 aaKnown RBP17.28■□□□□ 0.36
H3F3B-209ENST00000589949 PTRHD1Q6GMV3 140 aaKnown RBP17.28■□□□□ 0.36
H3F3B-209ENST00000589949 TTLL10Q6ZVT0 673 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 EFCAB3Q8N7B9 438 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 ZNF285Q96NJ3 590 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 MESP1Q9BRJ9 268 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 KIFC1Q9BW19 673 aa17.28■□□□□ 0.36
H3F3B-209ENST00000589949 ZNF552Q9H707 407 aaPredicted RBP17.28■□□□□ 0.36
H3F3B-209ENST00000589949 LZTFL1Q9NQ48 299 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms