RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 HSPA14Q0VDF9 509 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 AFTPHQ6ULP2 937 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 PPP1R21Q6ZMI0 780 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 PEX26Q7Z412 305 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 LINC00523Q86TU6 105 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 UBL4BQ8N7F7 174 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 HDAC10Q969S8 669 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 IL17FQ96PD4 163 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 TTC1Q99614 292 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 CHRNA10Q9GZZ6 450 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 LACRTQ9GZZ8 138 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 SLC2A6Q9UGQ3 507 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 SLC5A6Q9Y289 635 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 REXO2Q9Y3B8 237 aaKnown RBP16.16■□□□□ 0.18
LINC01842-201ENST00000588275 MYO9AB2RTY4 2548 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 CACNA1DQ01668 2161 aa16.16■□□□□ 0.18
LINC01842-201ENST00000588275 F8W8V4 182 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 AGPSO00116 658 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 LDLRP01130 860 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 RAB28P51157 221 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 CDH17Q12864 832 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 PCM1Q15154 2024 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 HIF1AQ16665 826 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 DOPEY1Q5JWR5 2465 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 IRAK1BP1Q5VVH5 260 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 IGFL3Q6UXB1 125 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 SHISA6Q6ZSJ9 500 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 KIAA1328Q86T90 577 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 CUZD1Q86UP6 607 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 VRK3Q8IV63 474 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 METTL27Q8N6F8 245 aaPredicted RBP16.15■□□□□ 0.18
LINC01842-201ENST00000588275 LRRC57Q8N9N7 239 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 OR13J1Q8NGT2 312 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 OR6P1Q8NGX9 317 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 RANBP9Q96S59 729 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 SLC6A20Q9NP91 592 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 FBXL4Q9UKA2 621 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 NTNG1Q9Y2I2 539 aa16.15■□□□□ 0.18
LINC01842-201ENST00000588275 MDC1Q14676 2089 aaKnown RBP16.15■□□□□ 0.18
LINC01842-201ENST00000588275 A0A1B0GX78 115 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 HEATR9A2RTY3 570 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 BTNL10A8MVZ5 291 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 E7EVH7 732 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 FTCDO95954 541 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 MCM3P25205 808 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 CCR7P32248 378 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 GRIA3P42263 894 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 ARSFP54793 590 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 AIMP2Q13155 320 aaKnown RBP16.14■□□□□ 0.17
LINC01842-201ENST00000588275 FASTKD1Q53R41 847 aaKnown RBP16.14■□□□□ 0.17
LINC01842-201ENST00000588275 DNAJC21Q5F1R6 531 aaKnown RBP16.14■□□□□ 0.17
LINC01842-201ENST00000588275 RAD9BQ6WBX8 426 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 Q6ZS92 163 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 MCATQ8IVS2 390 aaKnown RBP16.14■□□□□ 0.17
LINC01842-201ENST00000588275 SLC22A15Q8IZD6 547 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 LINC01555Q8NAE3 123 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 LKAAEAR1Q8TD35 194 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.14■□□□□ 0.17
LINC01842-201ENST00000588275 ATG4AQ8WYN0 398 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 CNDP1Q96KN2 507 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 PANX2Q96RD6 677 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 WDR77Q9BQA1 342 aaPredicted RBP16.14■□□□□ 0.17
LINC01842-201ENST00000588275 TSSK1BQ9BXA7 367 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 SOX17Q9H6I2 414 aaPredicted RBP16.14■□□□□ 0.17
LINC01842-201ENST00000588275 SLC22A11Q9NSA0 550 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 SLC39A10Q9ULF5 831 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 PCDHGA10Q9Y5H3 936 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 CSAG2Q9Y5P2 127 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 CENPEQ02224 2701 aa16.14■□□□□ 0.17
LINC01842-201ENST00000588275 TCRBV7S2A1N4TA0A589 114 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 IQCF5A8MTL0 148 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 IFNB1P01574 187 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 RPN2P04844 631 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 PIM1P11309 404 aaPredicted RBP16.13■□□□□ 0.17
LINC01842-201ENST00000588275 ITGAXP20702 1163 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 MMP11P24347 488 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 DCTP40126 519 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 PRAMEP78395 509 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 KLF1Q13351 362 aaPredicted RBP16.13■□□□□ 0.17
LINC01842-201ENST00000588275 SF1Q15637 639 aaKnown RBP16.13■□□□□ 0.17
LINC01842-201ENST00000588275 TSTD2Q5T7W7 516 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 PRAMEF13Q5VWM6 474 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 DCUN1D3Q8IWE4 304 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 PARP9Q8IXQ6 854 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 KRT222Q8N1A0 295 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 TTC29Q8NA56 475 aaPredicted RBP16.13■□□□□ 0.17
LINC01842-201ENST00000588275 OR4L1Q8NH43 312 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 SLC35B2Q8TB61 432 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 UBE2Q2Q8WVN8 375 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 FKBP10Q96AY3 582 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 SLC22A18Q96BI1 424 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 AGPAT4Q9NRZ5 378 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 CUTCQ9NTM9 273 aa16.13■□□□□ 0.17
LINC01842-201ENST00000588275 INTS7Q9NVH2 962 aaKnown RBP16.13■□□□□ 0.17
LINC01842-201ENST00000588275 NOVA2Q9UNW9 492 aaKnown RBP16.13■□□□□ 0.17
LINC01842-201ENST00000588275 DSCR3O14972 297 aa16.12■□□□□ 0.17
LINC01842-201ENST00000588275 APOA4P06727 396 aa16.12■□□□□ 0.17
LINC01842-201ENST00000588275 CD9P21926 228 aa16.12■□□□□ 0.17
LINC01842-201ENST00000588275 PSMA3P25788 255 aa16.12■□□□□ 0.17
LINC01842-201ENST00000588275 PPARGP37231 505 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms