RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 KLHL20Q9Y2M5 609 aa15.29■□□□□ 0.04
CRLF3-203ENST00000578692 PPP2R2CQ9Y2T4 447 aa15.29■□□□□ 0.04
CRLF3-203ENST00000578692 TNRC6AQ8NDV7 1962 aaKnown RBP15.29■□□□□ 0.04
CRLF3-203ENST00000578692 RASGRF2O14827 1237 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 ZNF185O15231 689 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 ZSCAN9O15535 394 aaPredicted RBP15.28■□□□□ 0.04
CRLF3-203ENST00000578692 NRDCO43847 1150 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 KLF7O75840 302 aaPredicted RBP15.28■□□□□ 0.04
CRLF3-203ENST00000578692 S1PR4O95977 384 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 CD63P08962 238 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 ARNTP27540 789 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 TERF1P54274 439 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 MLLT10P55197 1068 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 EIF3BP55884 814 aaKnown RBP15.28■□□□□ 0.04
CRLF3-203ENST00000578692 SARNPP82979 210 aaKnown RBP15.28■□□□□ 0.04
CRLF3-203ENST00000578692 SSPNQ14714 243 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 SF1Q15637 639 aaKnown RBP15.28■□□□□ 0.04
CRLF3-203ENST00000578692 TRIP13Q15645 432 aaPredicted RBP15.28■□□□□ 0.04
CRLF3-203ENST00000578692 PAPD7Q5XG87 772 aaKnown RBP15.28■□□□□ 0.04
CRLF3-203ENST00000578692 MRNIPQ6NTE8 343 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 RAB43Q86YS6 212 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 MCATQ8IVS2 390 aaKnown RBP15.28■□□□□ 0.04
CRLF3-203ENST00000578692 PROKR1Q8TCW9 393 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 SKA2Q8WVK7 121 aaPredicted RBP15.28■□□□□ 0.04
CRLF3-203ENST00000578692 GBP5Q96PP8 586 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 NDC1Q9BTX1 674 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 TXLNGQ9NUQ3 528 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 EURLQ9NYK6 297 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 SRPK3Q9UPE1 567 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 PLAAQ9Y263 795 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 MRFAP1Q9Y605 127 aa15.28■□□□□ 0.04
CRLF3-203ENST00000578692 SEC16AO15027 2179 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 MED13Q9UHV7 2174 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 GOLGA8KD6RF30 607 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 GOLGA8TH3BQL2 631 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 PFDN6O15212 129 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 CEACAM4O75871 244 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 C1orf105O95561 183 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 ATXN8OSP0DMR3 200 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 FMO4P31512 558 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 RRADP55042 308 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 CTSL3PQ5NE16 218 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 FIGLAQ6QHK4 219 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 TAX1BP1Q86VP1 789 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 MIB2Q96AX9 1013 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 BIRC8Q96P09 236 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 TCF12Q99081 682 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 RAB11FIP5Q9BXF6 653 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 INTS7Q9NVH2 962 aaKnown RBP15.27■□□□□ 0.04
CRLF3-203ENST00000578692 IFT80Q9P2H3 777 aaPredicted RBP15.27■□□□□ 0.04
CRLF3-203ENST00000578692 NDOR1Q9UHB4 597 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 ZNF451Q9Y4E5 1061 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 PCDHGB7Q9Y5F8 929 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 NFS1Q9Y697 457 aa15.27■□□□□ 0.04
CRLF3-203ENST00000578692 SNRNP200O75643 2136 aaKnown RBP15.27■□□□□ 0.03
CRLF3-203ENST00000578692 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.26■□□□□ 0.03
CRLF3-203ENST00000578692 A6NL46 340 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 PRICKLE3O43900 615 aaPredicted RBP15.26■□□□□ 0.03
CRLF3-203ENST00000578692 AVILO75366 819 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 KRT14P02533 472 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 ALAS2P22557 587 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 OTX2P32243 289 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 GRIA3P42263 894 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 VPS41P49754 854 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 GPS1Q13098 491 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 ATP1A4Q13733 1029 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 KCNJ11Q14654 390 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 ZC3H12BQ5HYM0 836 aaKnown RBP15.26■□□□□ 0.03
CRLF3-203ENST00000578692 FCRL6Q6DN72 434 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 RAB42Q8N4Z0 105 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 FDCSPQ8NFU4 85 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 MAGEC3Q8TD91 643 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 DENND1AQ8TEH3 1009 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 ZUFSPQ96AP4 578 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 FOPNLQ96NB1 174 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 IP6K3Q96PC2 410 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 G3BP2Q9UN86 482 aaKnown RBP15.26■□□□□ 0.03
CRLF3-203ENST00000578692 PTRH2Q9Y3E5 179 aaKnown RBP15.26■□□□□ 0.03
CRLF3-203ENST00000578692 CCDC88CQ9P219 2028 aa15.26■□□□□ 0.03
CRLF3-203ENST00000578692 ASH1LQ9NR48 2969 aaKnown RBP15.26■□□□□ 0.03
CRLF3-203ENST00000578692 TTLL8A6PVC2 850 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 TARM1B6A8C7 271 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 H3BMM5 538 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 FKBP9O95302 570 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 PAMP19021 973 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 CHRM3P20309 590 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 FOLR3P41439 243 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 MAGEA6P43360 314 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 BDKRB1P46663 353 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 ARSFP54793 590 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 UBAP2LQ14157 1087 aaKnown RBP15.25■□□□□ 0.03
CRLF3-203ENST00000578692 SLC9A5Q14940 896 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 TYSND1Q2T9J0 566 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 CCSMST1Q4G0I0 132 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 NADK2Q4G0N4 442 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 NKAIN1Q4KMZ8 207 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 RNF187Q5TA31 235 aaPredicted RBP15.25■□□□□ 0.03
CRLF3-203ENST00000578692 ARMC3Q5W041 872 aa15.25■□□□□ 0.03
CRLF3-203ENST00000578692 KIAA0930Q6ICG6 404 aaPredicted RBP15.25■□□□□ 0.03
CRLF3-203ENST00000578692 MRPL14Q6P1L8 145 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms