RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 TLR1Q15399 786 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 ZIC1Q15915 447 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 FAM180AQ6UWF9 173 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 UNC5DQ6UXZ4 953 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 TTLL10Q6ZVT0 673 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 OVCH1Q7RTY7 1134 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 CUZD1Q86UP6 607 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 MCATQ8IVS2 390 aaKnown RBP13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 DCUN1D3Q8IWE4 304 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 TXLNBQ8N3L3 684 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 UBL4BQ8N7F7 174 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 DNAAF3Q8N9W5 541 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 DNAJB14Q8TBM8 379 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 ASZ1Q8WWH4 475 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 CNDP1Q96KN2 507 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 BARD1Q99728 777 aaKnown RBP13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 LHPPQ9H008 270 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 TSPY26PQ9H489 355 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 SLC6A20Q9NP91 592 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 SPHK1Q9NYA1 384 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 ANAPC5Q9UJX4 755 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 SLC39A10Q9ULF5 831 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 NOVA2Q9UNW9 492 aaKnown RBP13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 SHANK1Q9Y566 2161 aa13.66□□□□□ -0.22
SMARCD2-205ENST00000577686 A0A1B0GUH1 482 aa13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 SLC5A10A0PJK1 596 aa13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 UMODP07911 640 aa13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 UQCRHP07919 91 aa13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 TPH1P17752 444 aa13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 MAGP20916 626 aa13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 CDH17Q12864 832 aa13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 ZNF169Q14929 603 aaPredicted RBP13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 KCTD11Q693B1 232 aa13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 NLRP9Q7RTR0 991 aa13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 TICAM1Q8IUC6 712 aa13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 PIANPQ8IYJ0 282 aa13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 SLC26A1Q9H2B4 701 aa13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 CUTCQ9NTM9 273 aa13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 PLAGL1Q9UM63 463 aa13.65□□□□□ -0.22
SMARCD2-205ENST00000577686 E7EVH7 732 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 PRPF4O43172 522 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■■□□□ 13.5
SMARCD2-205ENST00000577686 HNRNPRO43390 633 aaKnown RBP13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 ONECUT2O95948 504 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 CD9P21926 228 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 FDXRP22570 491 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 COL8A1P27658 744 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 AP2B1P63010 937 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 PRAMEP78395 509 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 OCA2Q04671 838 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 TBX2Q13207 712 aaPredicted RBP13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 SF1Q15637 639 aaKnown RBP13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 FASTKD1Q53R41 847 aaKnown RBP13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 CRB2Q5IJ48 1285 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 IGFL2Q6UWQ7 119 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 ISLR2Q6UXK2 745 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 PPP1R21Q6ZMI0 780 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 SLC22A15Q8IZD6 547 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 SYCE1Q8N0S2 351 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 FAM71DQ8N9W8 422 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 PANX3Q96QZ0 392 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 FAM118BQ9BPY3 351 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 SELENOSQ9BQE4 189 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 IMPACTQ9P2X3 320 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 RIMKLBQ9ULI2 386 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 DOPEY1Q5JWR5 2465 aa13.64□□□□□ -0.23
SMARCD2-205ENST00000577686 MROH6A6NGR9 719 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 MIF4GDA9UHW6 222 aaKnown RBP13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 BHMG1C9JSJ3 638 aaPredicted RBP13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 MAP2K7O14733 419 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 KPNA5O15131 536 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 SRPX2O60687 465 aaPredicted RBP13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 USP1O94782 785 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 PRSS56P0CW18 603 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 MYBL2P10244 700 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 ERVK-10P10266 1014 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 PSMA3P25788 255 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 FOXN2P32314 431 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 HSPA14Q0VDF9 509 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 INAQ16352 499 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 NKG7Q16617 165 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 HIF1AQ16665 826 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 PRMT9Q6P2P2 845 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 KCNMB4Q86W47 210 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 BCORP1Q8N888 145 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 OR2L8Q8NGY9 312 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 FLVCR1-AS1Q8TAF5 88 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 MAGEC3Q8TD91 643 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 FAR1Q8WVX9 515 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 INPP5DQ92835 1189 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 ZUFSPQ96AP4 578 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 THOC3Q96J01 351 aaKnown RBP13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 FOPNLQ96NB1 174 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 LMF1Q96S06 567 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 RANBP9Q96S59 729 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 NRTNQ99748 197 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 CRB3Q9BUF7 120 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 CARD6Q9BX69 1037 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 TRIM5Q9C035 493 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 AMFRQ9UKV5 643 aa13.63□□□□□ -0.23
SMARCD2-205ENST00000577686 ENTPD4Q9Y227 616 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms