RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 KLHL42Q9P2K6 505 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 IL17BQ9UHF5 180 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 CDC23Q9UJX2 597 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 MAD1L1Q9Y6D9 718 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 BAHCC1Q9P281 2608 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 SPTA1P02549 2419 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 ESYT3A0FGR9 886 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 CXorf49A8MYA2 514 aaPredicted RBP8.37□□□□□ -1.07
SMG6-216ENST00000575176 C2orf74A8MZ97 194 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 H3BMM5 538 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 GFYI3L273 518 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 SMAPO00193 183 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 POLR1CO15160 346 aaPredicted RBP8.37□□□□□ -1.07
SMG6-216ENST00000575176 SPAG6O75602 509 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 RASSF9O75901 435 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 PIAS1O75925 651 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 MED26O95402 600 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 TTC4O95801 387 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 APOA4P06727 396 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 PAMP19021 973 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 MAGP20916 626 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 CASQ1P31415 396 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 SKIV2L2P42285 1042 aaKnown RBP8.37□□□□□ -1.07
SMG6-216ENST00000575176 UCNP55089 124 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 TUBB4BP68371 445 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 CXADRP78310 365 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 HSD11B2P80365 405 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 VAC14Q08AM6 782 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 GPS2Q13227 327 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 TUBB2AQ13885 445 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 IL11RAQ14626 422 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 PPP1R3AQ16821 1122 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 KLHL38Q2WGJ6 581 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 DEFB110Q30KQ9 67 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 LINC00303Q3SY05 128 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 FCRL6Q6DN72 434 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 KLHL35Q6PF15 583 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 FAM198BQ6UWH4 519 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 KIAA0408Q6ZU52 694 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 NEK10Q6ZWH5 1172 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 OTOAQ7RTW8 1153 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 ANKMY2Q8IV38 441 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 CPNE9Q8IYJ1 553 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 DNAJC22Q8N4W6 341 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 LRRN4CLQ8ND94 238 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 FBXO36Q8NEA4 188 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 OR2A1Q8NGT9 310 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 ASB11Q8WXH4 323 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 ZPBPQ9BS86 351 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 NAT9Q9BTE0 207 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 TUBB2BQ9BVA1 445 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 ZMYND15Q9H091 742 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 KLHL25Q9H0H3 589 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 DPH5Q9H2P9 285 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 SLC6A20Q9NP91 592 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 ZC3H7BQ9UGR2 993 aaKnown RBP8.37□□□□□ -1.07
SMG6-216ENST00000575176 POLG2Q9UHN1 485 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 ADAMTS6Q9UKP5 1117 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 SH2B3Q9UQQ2 575 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 DHRS7Q9Y394 339 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 MRPS18BQ9Y676 258 aaKnown RBP8.37□□□□□ -1.07
SMG6-216ENST00000575176 DOCK10Q96BY6 2186 aa8.37□□□□□ -1.07
SMG6-216ENST00000575176 CPAMD8Q8IZJ3 1885 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 A0A0J9YY10 115 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 PIPSLA2A3N6 862 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 GSAPA4D1B5 854 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 EIF3FO00303 357 aaPredicted RBP8.36□□□□□ -1.07
SMG6-216ENST00000575176 ATXN7O15265 892 aaPredicted RBP8.36□□□□□ -1.07
SMG6-216ENST00000575176 CTSVO60911 334 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 CNOT3O75175 753 aaKnown RBP8.36□□□□□ -1.07
SMG6-216ENST00000575176 KIAA0754O94854 1291 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 FURINP09958 794 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 IMPA1P29218 277 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 OAS2P29728 719 aaKnown RBP8.36□□□□□ -1.07
SMG6-216ENST00000575176 PPARGP37231 505 aaPredicted RBP8.36□□□□□ -1.07
SMG6-216ENST00000575176 PAFAH1B1P43034 410 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 ARL4CP56559 192 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 CYP4F2P78329 520 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 ABHD18Q0P651 414 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 PDIA2Q13087 525 aaKnown RBP8.36□□□□□ -1.07
SMG6-216ENST00000575176 KIR2DS3Q14952 304 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 TMED2Q15363 201 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 PHKG1Q16816 387 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 ARHGAP40Q5TG30 622 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 SBSNQ6UWP8 590 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 LRRC69Q6ZNQ3 347 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 TAX1BP1Q86VP1 789 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 ZC3HC1Q86WB0 502 aaKnown RBP8.36□□□□□ -1.07
SMG6-216ENST00000575176 CACNA2D3Q8IZS8 1091 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 NLGN4XQ8N0W4 816 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 PDIK1LQ8N165 341 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 OTUD6BQ8N6M0 293 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 GALNT6Q8NCL4 622 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 NLGN4YQ8NFZ3 816 aaPredicted RBP8.36□□□□□ -1.07
SMG6-216ENST00000575176 ZNF480Q8WV37 535 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 CFAP36Q96G28 342 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 SLC45A3Q96JT2 553 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 LRFN5Q96NI6 719 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 FCRL4Q96PJ5 515 aa8.36□□□□□ -1.07
SMG6-216ENST00000575176 TTC1Q99614 292 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms