RNA–Protein interactions for RNA: ENST00000574763.5

LITAF-215, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LITAF, Length 717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-215ENST00000574763 PANX3Q96QZ0 392 aa16.68■□□□□ 0.26
LITAF-215ENST00000574763 TXLNGQ9NUQ3 528 aa16.68■□□□□ 0.26
LITAF-215ENST00000574763 SYBUQ9NX95 663 aa16.68■□□□□ 0.26
LITAF-215ENST00000574763 DHCR7Q9UBM7 475 aaKnown RBP16.68■□□□□ 0.26
LITAF-215ENST00000574763 GPN3Q9UHW5 284 aaPredicted RBP16.68■□□□□ 0.26
LITAF-215ENST00000574763 SPENQ96T58 3664 aaKnown RBP16.67■□□□□ 0.26
LITAF-215ENST00000574763 USP9XQ93008 2570 aaPredicted RBP16.67■□□□□ 0.26
LITAF-215ENST00000574763 RP1L1Q8IWN7 2480 aaPredicted RBP16.67■□□□□ 0.26
LITAF-215ENST00000574763 RASGRF2O14827 1237 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 ZNF185O15231 689 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 S1PR4O95977 384 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 TPSB2P20231 275 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 RPS3P23396 243 aaKnown RBP eCLIP16.67■□□□□ 0.264e-7■■■□□ 16.1
LITAF-215ENST00000574763 OTX2P32243 289 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 CXCR5P32302 372 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 CD97P48960 835 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 RRADP55042 308 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 DCDP81605 110 aaKnown RBP16.67■□□□□ 0.26
LITAF-215ENST00000574763 CDK16Q00536 496 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 TPSAB1Q15661 275 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 KCTD19Q17RG1 926 aaPredicted RBP16.67■□□□□ 0.26
LITAF-215ENST00000574763 MED25Q71SY5 747 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 FDCSPQ8NFU4 85 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 OR2L8Q8NGY9 312 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 NDC1Q9BTX1 674 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 KIFC1Q9BW19 673 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 MRM3Q9HC36 420 aaKnown RBP16.67■□□□□ 0.26
LITAF-215ENST00000574763 HOMER3Q9NSC5 361 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 EURLQ9NYK6 297 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 IFT80Q9P2H3 777 aaPredicted RBP16.67■□□□□ 0.26
LITAF-215ENST00000574763 NDOR1Q9UHB4 597 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 SLC39A10Q9ULF5 831 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 TTC7AQ9ULT0 858 aaPredicted RBP16.67■□□□□ 0.26
LITAF-215ENST00000574763 G3BP2Q9UN86 482 aaKnown RBP16.67■□□□□ 0.26
LITAF-215ENST00000574763 ZNF451Q9Y4E5 1061 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 PCDHGB7Q9Y5F8 929 aa16.67■□□□□ 0.26
LITAF-215ENST00000574763 TCRBV7S3A2A0A539 114 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 A6NL46 340 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 TTLL8A6PVC2 850 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 KPNA5O15131 536 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 VAPBO95292 243 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 ARNTP27540 789 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 FOLR3P41439 243 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 EIF3BP55884 814 aaKnown RBP16.66■□□□□ 0.26
LITAF-215ENST00000574763 UBAP2LQ14157 1087 aaKnown RBP16.66■□□□□ 0.26
LITAF-215ENST00000574763 SLC9A5Q14940 896 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 NADK2Q4G0N4 442 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 NKAIN1Q4KMZ8 207 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 LRRC8BQ6P9F7 803 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 TTC23LQ6PF05 361 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 CES3Q6UWW8 571 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 OTOAQ7RTW8 1153 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 MRGPREQ86SM8 312 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 ATCAYQ86WG3 371 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 MCATQ8IVS2 390 aaKnown RBP16.66■□□□□ 0.26
LITAF-215ENST00000574763 LRRC8AQ8IWT6 810 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 PRELID2Q8N945 189 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 SKA2Q8WVK7 121 aaPredicted RBP16.66■□□□□ 0.26
LITAF-215ENST00000574763 MFSD3Q96ES6 412 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 RAB11FIP5Q9BXF6 653 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 INTS7Q9NVH2 962 aaKnown RBP16.66■□□□□ 0.26
LITAF-215ENST00000574763 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.66■□□□□ 0.26
LITAF-215ENST00000574763 SOX13Q9UN79 622 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 PTRH2Q9Y3E5 179 aaKnown RBP16.66■□□□□ 0.26
LITAF-215ENST00000574763 NFS1Q9Y697 457 aa16.66■□□□□ 0.26
LITAF-215ENST00000574763 CLEC18AA5D8T8 446 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 CYSRT1A8MQ03 144 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 CNOT3O75175 753 aaKnown RBP16.65■□□□□ 0.26
LITAF-215ENST00000574763 C1orf105O95561 183 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 CD63P08962 238 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 BDKRB1P46663 353 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 TERF1P54274 439 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 CCZ1BP86790 482 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 CCZ1P86791 482 aaPredicted RBP16.65■□□□□ 0.26
LITAF-215ENST00000574763 SSPNQ14714 243 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 SF1Q15637 639 aaKnown RBP16.65■□□□□ 0.26
LITAF-215ENST00000574763 TRIP13Q15645 432 aaPredicted RBP16.65■□□□□ 0.26
LITAF-215ENST00000574763 CTSL3PQ5NE16 218 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 MRNIPQ6NTE8 343 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 CLEC18BQ6UXF7 455 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 SDCCAG8Q86SQ7 713 aaPredicted RBP16.65■□□□□ 0.26
LITAF-215ENST00000574763 CLEC18CQ8NCF0 446 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 OR2Y1Q8NGV0 311 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 DLG3Q92796 817 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 RAD51AP1Q96B01 352 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 IP6K3Q96PC2 410 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 NUDT9Q9BW91 350 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 GPR83Q9NYM4 423 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 RUVBL2Q9Y230 463 aaKnown RBP16.65■□□□□ 0.26
LITAF-215ENST00000574763 NAV2Q8IVL1 2488 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 UTP20O75691 2785 aaKnown RBP16.65■□□□□ 0.26
LITAF-215ENST00000574763 ANKRD12Q6UB98 2062 aa16.65■□□□□ 0.26
LITAF-215ENST00000574763 USP9YO00507 2555 aaPredicted RBP16.64■□□□□ 0.25
LITAF-215ENST00000574763 GOLGA8KD6RF30 607 aa16.64■□□□□ 0.25
LITAF-215ENST00000574763 GOLGA8TH3BQL2 631 aa16.64■□□□□ 0.25
LITAF-215ENST00000574763 PRICKLE3O43900 615 aaPredicted RBP16.64■□□□□ 0.25
LITAF-215ENST00000574763 FMO4P31512 558 aa16.64■□□□□ 0.25
LITAF-215ENST00000574763 GCGRP47871 477 aa16.64■□□□□ 0.25
LITAF-215ENST00000574763 VPS41P49754 854 aa16.64■□□□□ 0.25
LITAF-215ENST00000574763 GPS1Q13098 491 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms