RNA–Protein interactions for RNA: ENST00000573725.1

PRPF8-209, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-209ENST00000573725 IFRD2Q12894 506 aaPredicted RBP6.33□□□□□ -1.4
PRPF8-209ENST00000573725 CSTF3Q12996 717 aaKnown RBP6.33□□□□□ -1.4
PRPF8-209ENST00000573725 KLF10Q13118 480 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 IKZF1Q13422 519 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 CEACAM7Q14002 265 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 ELOAQ14241 798 aaKnown RBP6.33□□□□□ -1.4
PRPF8-209ENST00000573725 MESDQ14696 234 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 DRAP1Q14919 205 aaPredicted RBP6.33□□□□□ -1.4
PRPF8-209ENST00000573725 ZMYND11Q15326 602 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 SURF1Q15526 300 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 LTB4RQ15722 352 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 CHI3L2Q15782 390 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 SNRNP35Q16560 246 aaKnown RBP6.33□□□□□ -1.4
PRPF8-209ENST00000573725 DGUOKQ16854 277 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 SLC36A3Q495N2 470 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 PAGE2BQ5JRK9 111 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 LY6G5CQ5SRR4 150 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 CATSPEREQ5SY80 951 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 CCNYL2Q5T2Q4 361 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 BROXQ5VW32 411 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 STEAP3Q658P3 488 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 PMF1Q6P1K2 205 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 TMEM81Q6P7N7 255 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 CRTC3Q6UUV7 619 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 PAQR9Q6ZVX9 377 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 UTS2BQ765I0 119 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 LINC00523Q86TU6 105 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 ADCK1Q86TW2 530 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 CPNE8Q86YQ8 564 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 LGI2Q8N0V4 545 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 B3GALNT2Q8NCR0 500 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 OR6B3Q8NGW1 331 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 RHOXF1Q8NHV9 184 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 SCAMP5Q8TAC9 235 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 ATG4AQ8WYN0 398 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 LRTOMTQ8WZ04 291 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 ST8SIA2Q92186 375 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 PIGKQ92643 395 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 PTP4A1Q93096 173 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 WBP2Q969T9 261 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 ATP6V1E2Q96A05 226 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 ELMO3Q96BJ8 720 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 AHCYL2Q96HN2 611 aaKnown RBP6.33□□□□□ -1.4
PRPF8-209ENST00000573725 SERAC1Q96JX3 654 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 SORT1Q99523 831 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 CGRRF1Q99675 332 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 SEC22CQ9BRL7 303 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 TTYH2Q9BSA4 534 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 C9orf16Q9BUW7 83 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 ADI1Q9BV57 179 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 TMEM121BQ9BXQ6 578 aaPredicted RBP6.33□□□□□ -1.4
PRPF8-209ENST00000573725 ZNF518BQ9C0D4 1074 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 XYLT2Q9H1B5 865 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 LHX5Q9H2C1 402 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 ACSS3Q9H6R3 686 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 ZNF395Q9H8N7 513 aaPredicted RBP6.33□□□□□ -1.4
PRPF8-209ENST00000573725 LRRC40Q9H9A6 602 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 TMEM9BQ9NQ34 198 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 AGPAT3Q9NRZ7 376 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 TMEM74BQ9NUR3 256 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 PAK1IP1Q9NWT1 392 aaPredicted RBP6.33□□□□□ -1.4
PRPF8-209ENST00000573725 FBXL12Q9NXK8 326 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 TAS2R14Q9NYV8 317 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.33□□□□□ -1.4
PRPF8-209ENST00000573725 IFT80Q9P2H3 777 aaPredicted RBP6.33□□□□□ -1.4
PRPF8-209ENST00000573725 MARCOQ9UEW3 520 aaPredicted RBP6.33□□□□□ -1.4
PRPF8-209ENST00000573725 CYB5R1Q9UHQ9 305 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 PFDN2Q9UHV9 154 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 PACSIN3Q9UKS6 424 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 HCN2Q9UL51 889 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 MRPS7Q9Y2R9 242 aaKnown RBP6.33□□□□□ -1.4
PRPF8-209ENST00000573725 PCDHGA7Q9Y5G6 932 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 GMPPBQ9Y5P6 360 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 ACTL7AQ9Y615 435 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 RAD54BQ9Y620 910 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 PMF1-BGLAPU3KQ54 211 aa6.33□□□□□ -1.4
PRPF8-209ENST00000573725 LAMA5O15230 3695 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 MUC22E2RYF6 1773 aaPredicted RBP6.32□□□□□ -1.4
PRPF8-209ENST00000573725 FREM2Q5SZK8 3169 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 E2F8A0AVK6 867 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 SH3D21A4FU49 640 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 SAC3D1A6NKF1 404 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 A8MV72 311 aaPredicted RBP6.32□□□□□ -1.4
PRPF8-209ENST00000573725 LINC00587B1AMM8 73 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 HNRNPCL2B2RXH8 293 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 TRIM38O00635 465 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 TOR1BO14657 336 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 TNFRSF10BO14763 440 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 PLD2O14939 933 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 COCHO43405 550 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 SYNCRIPO60506 623 aaKnown RBP6.32□□□□□ -1.4
PRPF8-209ENST00000573725 GREM1O60565 184 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 CPNE3O75131 537 aaKnown RBP6.32□□□□□ -1.4
PRPF8-209ENST00000573725 ZMPSTE24O75844 475 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 GABARAPO95166 117 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 SNAPINO95295 136 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 ADH1CP00326 375 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 APODP05090 189 aa6.32□□□□□ -1.4
PRPF8-209ENST00000573725 GNAO1P09471 354 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms