RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 TMEM63AO94886 807 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 KRT14P02533 472 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 TPBGLP0DKB5 382 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 PAMP19021 973 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 CD9P21926 228 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 RPS3P23396 243 aaKnown RBP eCLIP9.3□□□□□ -0.924e-7■■■■□ 21.2
NPLOC4-212ENST00000573328 PEBP1P30086 187 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 FOLR3P41439 243 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 BDKRB1P46663 353 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 RRADP55042 308 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 CDK16Q00536 496 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 SF1Q15637 639 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 ZIC1Q15915 447 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 IGFBP7Q16270 282 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 KYNUQ16719 465 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 RNF187Q5TA31 235 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 LMNTD1Q8N9Z9 388 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 FAM136AQ96C01 138 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 NDC1Q9BTX1 674 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 SPRTNQ9H040 489 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 MRM3Q9HC36 420 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 IFT80Q9P2H3 777 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 DHCR7Q9UBM7 475 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 SOX13Q9UN79 622 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 PLCL2Q9UPR0 1127 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 RUVBL2Q9Y230 463 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 CDYLQ9Y232 598 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 KLHL20Q9Y2M5 609 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 MRFAP1Q9Y605 127 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 NBASA2RRP1 2371 aa9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 SPENQ96T58 3664 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 PRRC2CQ9Y520 2896 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-212ENST00000573328 FLNCQ14315 2725 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 DOPEY2Q9Y3R5 2298 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 A6NL46 340 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 GOLGA8MH3BSY2 632 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 ZNF185O15231 689 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 HCRTR1O43613 425 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 NIPSNAP2O75323 286 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 SLCO2B1O94956 709 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 S1PR4O95977 384 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 CBSLP0DN79 551 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 CHRM3P20309 590 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 ALAS2P22557 587 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 FMO4P31512 558 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 CBSP35520 551 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 DCDP81605 110 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 TSTA3Q13630 321 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 ATP1A4Q13733 1029 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 KCNJ11Q14654 390 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 CTSL3PQ5NE16 218 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 RHBDD2Q6NTF9 364 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 TLDC1Q6P9B6 456 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 EFCAB3Q8N7B9 438 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 PRELID2Q8N945 189 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 TTC29Q8NA56 475 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 LINC01555Q8NAE3 123 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 OR2L8Q8NGY9 312 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 FLVCR1-AS1Q8TAF5 88 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 PROKR1Q8TCW9 393 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 MAGEC3Q8TD91 643 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 ADAMTS17Q8TE56 1095 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 DLG3Q92796 817 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 MAGOHBQ96A72 148 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 RAD51AP1Q96B01 352 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 ZNF669Q96BR6 464 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 NAP1L3Q99457 506 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 DHRS4Q9BTZ2 278 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 KIFC1Q9BW19 673 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 P2RY12Q9H244 342 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 CCDC68Q9H2F9 335 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 CRYL1Q9Y2S2 319 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 PTRH2Q9Y3E5 179 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 NFS1Q9Y697 457 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 DOCK10Q96BY6 2186 aa9.29□□□□□ -0.92
NPLOC4-212ENST00000573328 COL12A1Q99715 3063 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 PCSK5Q92824 1860 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 GOLGA6L10A0A0M3HER8 536 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 CTAGE9A4FU28 777 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 KRT87PA6NCN2 255 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 TTLL8A6PVC2 850 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 H3BMM5 538 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 PGRMC1O00264 195 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 PEX12O00623 359 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 AVILO75366 819 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 PDGFAP04085 211 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 CAPN1P07384 714 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 CTSBP07858 339 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 CD63P08962 238 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 OGNP20774 298 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 PSMB5P28074 263 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 CCNFP41002 786 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 GRIA3P42263 894 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 GABRA4P48169 554 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 MLLT10P55197 1068 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 FOXK1P85037 733 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 RAPSNQ13702 412 aa9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 THOC5Q13769 683 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 DHX34Q14147 1143 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-212ENST00000573328 ZC3H12BQ5HYM0 836 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms