RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 FAM25GB3EWG6 89 aa16.44■□□□□ 0.22
LITAF-209ENST00000571688 J3KR12 359 aa16.44■□□□□ 0.22
LITAF-209ENST00000571688 ARHGAP33O14559 1287 aa16.44■□□□□ 0.22
LITAF-209ENST00000571688 DNAJA1P31689 397 aaKnown RBP16.44■□□□□ 0.22
LITAF-209ENST00000571688 GRIK4Q16099 956 aa16.44■□□□□ 0.22
LITAF-209ENST00000571688 SPANXN4Q5MJ08 99 aa16.44■□□□□ 0.22
LITAF-209ENST00000571688 MARC1Q5VT66 337 aa16.44■□□□□ 0.22
LITAF-209ENST00000571688 ZNF438Q7Z4V0 828 aa16.44■□□□□ 0.22
LITAF-209ENST00000571688 TCAIMQ8N3R3 496 aa16.44■□□□□ 0.22
LITAF-209ENST00000571688 ANKK1Q8NFD2 765 aa16.44■□□□□ 0.22
LITAF-209ENST00000571688 Q96MT0 163 aa16.44■□□□□ 0.22
LITAF-209ENST00000571688 PHOX2BQ99453 314 aa16.44■□□□□ 0.22
LITAF-209ENST00000571688 GPR21Q99679 349 aa16.44■□□□□ 0.22
LITAF-209ENST00000571688 C16orf70Q9BSU1 422 aa16.44■□□□□ 0.22
LITAF-209ENST00000571688 SLC6A13Q9NSD5 602 aa16.44■□□□□ 0.22
LITAF-209ENST00000571688 HMX3A6NHT5 357 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 E9PAM4 449 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 UGT2B17O75795 530 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 TSPAN12O95859 305 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 PGRP06401 933 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 ITGA2P17301 1181 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 CYP2A7P20853 494 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 RPP38P78345 283 aaKnown RBP16.43■□□□□ 0.22
LITAF-209ENST00000571688 DDR2Q16832 855 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 HORMAD1Q86X24 394 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 RAB43Q86YS6 212 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 REM2Q8IYK8 340 aaPredicted RBP16.43■□□□□ 0.22
LITAF-209ENST00000571688 ARRDC2Q8TBH0 407 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 BLOC1S5Q8TDH9 187 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 FATE1Q969F0 183 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 FAM120BQ96EK7 910 aaKnown RBP16.43■□□□□ 0.22
LITAF-209ENST00000571688 CPPED1Q9BRF8 314 aaPredicted RBP16.43■□□□□ 0.22
LITAF-209ENST00000571688 CENPOQ9BU64 300 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 KRT84Q9NSB2 600 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 ERVK13-1Q9NX77 482 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 PDP1Q9P0J1 537 aaPredicted RBP16.43■□□□□ 0.22
LITAF-209ENST00000571688 PSORS1C1Q9UIG5 152 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 CCL27Q9Y4X3 112 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 PLXNB2O15031 1838 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 MYO1GB0I1T2 1018 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 FKBP9O95302 570 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 RRM2P31350 389 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 RPL38P63173 70 aaKnown RBP16.43■□□□□ 0.22
LITAF-209ENST00000571688 NRG1Q02297 640 aaPredicted RBP16.43■□□□□ 0.22
LITAF-209ENST00000571688 ABRAXAS2Q15018 415 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 GPSM1Q86YR5 675 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 GLB1L3Q8NCI6 653 aaPredicted RBP16.43■□□□□ 0.22
LITAF-209ENST00000571688 SMARCD1Q96GM5 515 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 ZFYVE19Q96K21 471 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 ZBED2Q9BTP6 218 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 IL1RAPQ9NPH3 570 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 WDR70Q9NW82 654 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 CD274Q9NZQ7 290 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 PCDHGB2Q9Y5G2 931 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 PAPPA2Q9BXP8 1791 aa16.43■□□□□ 0.22
LITAF-209ENST00000571688 WASH4PA8MWX3 477 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 TLL1O43897 1013 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 CNMDO75829 334 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 IL6P05231 212 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 YES1P07947 543 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 SLC19A1P41440 591 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 RFX2P48378 723 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 NPRL3Q12980 569 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 PARP15Q460N3 678 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 NOXA1Q86UR1 476 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 PGBD5Q8N414 524 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 PAF1Q8N7H5 531 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 TTC9Q92623 222 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 CDCA5Q96FF9 252 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 PPP3R2Q96LZ3 170 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 RIPOR3Q96MK2 946 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 SP110Q9HB58 689 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 CSNK1G1Q9HCP0 422 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 PLCXD1Q9NUJ7 323 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 CSADQ9Y600 493 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 CA12O43570 354 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 GPR32O75388 356 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 CDK1P06493 297 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 SLC2A4P14672 509 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 CA5AP35218 305 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 FBXO43Q4G163 708 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 FAM171A1Q5VUB5 890 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 P3H2Q8IVL5 708 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 ZNF675Q8TD23 568 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 OSMRQ99650 979 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 SLC30A2Q9BRI3 323 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 DPY30Q9C005 99 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 ACOXLQ9NUZ1 547 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 FKBP14Q9NWM8 211 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 FNIP2Q9P278 1114 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 KIF17Q9P2E2 1029 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 SAMD4AQ9UPU9 718 aaKnown RBP16.42■□□□□ 0.22
LITAF-209ENST00000571688 PCDHGA6Q9Y5G7 932 aa16.42■□□□□ 0.22
LITAF-209ENST00000571688 KDM4FA0A1W2PPD8 638 aa16.41■□□□□ 0.22
LITAF-209ENST00000571688 KRT87PA6NCN2 255 aa16.41■□□□□ 0.22
LITAF-209ENST00000571688 OR7A17O14581 309 aa16.41■□□□□ 0.22
LITAF-209ENST00000571688 MLIPQ5VWP3 458 aa16.41■□□□□ 0.22
LITAF-209ENST00000571688 LYPD8Q6UX82 237 aa16.41■□□□□ 0.22
LITAF-209ENST00000571688 BPHLQ86WA6 291 aaPredicted RBP16.41■□□□□ 0.22
LITAF-209ENST00000571688 IQCF2Q8IXL9 164 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms