RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 SPESP1Q6UW49 350 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 CEACAM20Q6UY09 585 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 LRRC69Q6ZNQ3 347 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 RASGRP3Q8IV61 690 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 CTAGE3PQ8IX95 158 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 D2HGDHQ8N465 521 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 PPM1NQ8N819 430 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 MAGEC3Q8TD91 643 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 KCNE4Q8WWG9 221 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 DLG3Q92796 817 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 MCMBPQ9BTE3 642 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 DDA1Q9BW61 102 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 SPRY4Q9C004 299 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 B3GNT4Q9C0J1 378 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 NINJ2Q9NZG7 142 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 MTRF1LQ9UGC7 380 aaKnown RBP12.57□□□□□ -0.4
CNOT1-213ENST00000568158 ADAMTS6Q9UKP5 1117 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 CORO1CQ9ULV4 474 aaPredicted RBP12.57□□□□□ -0.4
CNOT1-213ENST00000568158 KLHL20Q9Y2M5 609 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 SDK2Q58EX2 2172 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 WDFY3Q8IZQ1 3526 aa12.57□□□□□ -0.4
CNOT1-213ENST00000568158 SPTBP11277 2137 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 FREM2Q5SZK8 3169 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 A0A087WV48 116 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 ZBTB14O43829 449 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 PRICKLE3O43900 615 aaPredicted RBP12.56□□□□□ -0.4
CNOT1-213ENST00000568158 SYF2O95926 243 aaKnown RBP12.56□□□□□ -0.4
CNOT1-213ENST00000568158 CATP04040 527 aaKnown RBP12.56□□□□□ -0.4
CNOT1-213ENST00000568158 ENO3P13929 434 aaPredicted RBP12.56□□□□□ -0.4
CNOT1-213ENST00000568158 RGS4P49798 205 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 RAB15P59190 212 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 CLN3Q13286 438 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 PDAP1Q13442 181 aaKnown RBP12.56□□□□□ -0.4
CNOT1-213ENST00000568158 ZNF460Q14592 562 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 KIR2DS3Q14952 304 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 GPR19Q15760 415 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 ZIC1Q15915 447 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 UBE2R2Q712K3 238 aaPredicted RBP12.56□□□□□ -0.4
CNOT1-213ENST00000568158 TIPARPQ7Z3E1 657 aaKnown RBP12.56□□□□□ -0.4
CNOT1-213ENST00000568158 KMT5CQ86Y97 462 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 CEP97Q8IW35 865 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 SPACA3Q8IXA5 215 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 CDKL2Q92772 493 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 MRRFQ96E11 262 aaKnown RBP12.56□□□□□ -0.4
CNOT1-213ENST00000568158 LINGO1Q96FE5 620 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 PITPNM3Q9BZ71 974 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 ASPSCR1Q9BZE9 553 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 RHOJQ9H4E5 214 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 L2HGDHQ9H9P8 463 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 CAB39LQ9H9S4 337 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 FAM60AQ9NP50 221 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 SOHLH2Q9NX45 425 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 NSMCE4AQ9NXX6 385 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 LNPEPQ9UIQ6 1025 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 ACSL6Q9UKU0 697 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 NFU1Q9UMS0 254 aa12.56□□□□□ -0.4
CNOT1-213ENST00000568158 ADAMTS20P59510 1910 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 TEX51A0A1B0GUA7 166 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 A0A1W2PPV9 198 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 EIF3FO00303 357 aaPredicted RBP12.55□□□□□ -0.4
CNOT1-213ENST00000568158 HCRTR1O43613 425 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 ZNF500O60304 480 aaPredicted RBP12.55□□□□□ -0.4
CNOT1-213ENST00000568158 SPAG6O75602 509 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 TIAF1O95411 115 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 TSPAN12O95859 305 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 FGF5P12034 268 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 ZNF28P17035 718 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 PSMB5P28074 263 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 OAS2P29728 719 aaKnown RBP12.55□□□□□ -0.4
CNOT1-213ENST00000568158 IL2P60568 153 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 YBX1P67809 324 aaKnown RBP12.55□□□□□ -0.4
CNOT1-213ENST00000568158 ACY1Q03154 408 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 SRSF6Q13247 344 aaKnown RBP12.55□□□□□ -0.4
CNOT1-213ENST00000568158 IL11RAQ14626 422 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 EFTUD2Q15029 972 aaKnown RBP eCLIP12.55□□□□□ -0.41e-11■□□□□ 10
CNOT1-213ENST00000568158 SF1Q15637 639 aaKnown RBP12.55□□□□□ -0.4
CNOT1-213ENST00000568158 CYP2A13Q16696 494 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 SLC5A12Q1EHB4 618 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 TMTC4Q5T4D3 741 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 SUSD1Q6UWL2 747 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 DTX1Q86Y01 620 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 IFT20Q8IY31 132 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 CARFQ8N187 725 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 PPFIBP2Q8ND30 876 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 CRELD1Q96HD1 420 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 VPS39Q96JC1 886 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 FMO2Q99518 471 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 CPNE1Q99829 537 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 DPH1Q9BZG8 443 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 FAM129AQ9BZQ8 928 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 PDE7BQ9NP56 450 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 FGF21Q9NSA1 209 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.55□□□□□ -0.4
CNOT1-213ENST00000568158 IKZF3Q9UKT9 509 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 RARRES3Q9UL19 164 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 BTRCQ9Y297 605 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 PCDHB11Q9Y5F2 797 aa12.55□□□□□ -0.4
CNOT1-213ENST00000568158 A0A0J9YY10 115 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 MYO1CO00159 1063 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 EFSO43281 561 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms