RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 GPC4O75487 556 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 RPN2P04844 631 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 KLK3P07288 261 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 CHRM3P20309 590 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 RPS3P23396 243 aaKnown RBP eCLIP13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 PKLRP30613 574 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 RPL21P46778 160 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 ITGA8P53708 1063 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 RPS15P62841 145 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 KCNAB2Q13303 367 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 THOC5Q13769 683 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 ZIC1Q15915 447 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 CCSMST1Q4G0I0 132 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 ANKRD20A4Q4UJ75 823 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 ZNF789Q5FWF6 425 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 FAM69BQ5VUD6 431 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 LCN10Q6JVE6 187 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 NEPROQ6NW34 567 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 DCUN1D3Q8IWE4 304 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 OR8K5Q8NH50 307 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 LPGAT1Q92604 370 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 FCRL4Q96PJ5 515 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 PITPNM3Q9BZ71 974 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 TRIM31Q9BZY9 425 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 TRIM4Q9C037 500 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 ACTL8Q9H568 366 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 ZNF71Q9NQZ8 489 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 FBXO6Q9NRD1 293 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 SERTAD3Q9UJW9 196 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 ZCWPW2A0A1B0GU75 182 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 E5RI56 91 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 E7EQ34 232 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 TERTO14746 1132 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 NDC80O14777 642 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 PFDN6O15212 129 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 ZNF749O43361 778 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 HCRTR1O43613 425 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 CREG1O75629 220 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 CTSBP07858 339 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 OGNP20774 298 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 RAB28P51157 221 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 ITGA1P56199 1179 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 CBLBQ13191 982 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 CTBP1Q13363 440 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 KYNUQ16719 465 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 TYSND1Q2T9J0 566 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 MSS51Q4VC12 460 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 COLEC12Q5KU26 742 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 C1orf189Q5VU69 101 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 DUPD1Q68J44 220 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 ZNF470Q6ECI4 717 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 TTC23LQ6PF05 361 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 UNC5DQ6UXZ4 953 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 LRRC6Q86X45 466 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 DENND6AQ8IWF6 608 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 GPR135Q8IZ08 494 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 LINC01555Q8NAE3 123 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 BBOF1Q8ND07 529 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 APOBEC4Q8WW27 367 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 SPRTNQ9H040 489 aaPredicted RBP13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 LATS2Q9NRM7 1088 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 C20orf96Q9NUD7 363 aaPredicted RBP13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 GEMIN8Q9NWZ8 242 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 OR6C2Q9NZP2 312 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 WHRNQ9P202 907 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 GALPQ9UBC7 116 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 POLHQ9Y253 713 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 FARSAQ9Y285 508 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 SNX24Q9Y343 169 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 FER1L5A0AVI2 2057 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 PCM1Q15154 2024 aa13.15□□□□□ -0.3
VPS9D1-204ENST00000565023 C21orf140B9A014 251 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 MEN1O00255 615 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 KPNA5O15131 536 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 BANF1O75531 89 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 OR2B3O76000 313 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 USP1O94782 785 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 SLCO2B1O94956 709 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 C1orf105O95561 183 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 SFTPCP11686 197 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 PKMP14618 531 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 MAGP20916 626 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 CD9P21926 228 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 PTPN4P29074 926 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 DHX9Q08211 1270 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 TSTA3Q13630 321 aaPredicted RBP13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 GRB7Q14451 532 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 SLC9A5Q14940 896 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 KIR2DS3Q14952 304 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 SF1Q15637 639 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 SLC5A12Q1EHB4 618 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 PLEKHS1Q5SXH7 462 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 RNF187Q5TA31 235 aaPredicted RBP13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 CENPUQ71F23 418 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 SYTL1Q8IYJ3 562 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 PDIK1LQ8N165 341 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 ENDOVQ8N8Q3 282 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 MNS1Q8NEH6 495 aa13.14□□□□□ -0.31
VPS9D1-204ENST00000565023 FLVCR1-AS1Q8TAF5 88 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms