RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 CD9P21926 228 aa14.3□□□□□ -0.12
SNX29-203ENST00000564111 ARNTP27540 789 aa14.3□□□□□ -0.12
SNX29-203ENST00000564111 NFATC3Q12968 1075 aa14.3□□□□□ -0.12
SNX29-203ENST00000564111 ABRQ12979 859 aa14.3□□□□□ -0.12
SNX29-203ENST00000564111 LACTB2Q53H82 288 aaPredicted RBP14.3□□□□□ -0.12
SNX29-203ENST00000564111 SYTL1Q8IYJ3 562 aa14.3□□□□□ -0.12
SNX29-203ENST00000564111 KRT222Q8N1A0 295 aa14.3□□□□□ -0.12
SNX29-203ENST00000564111 TTC29Q8NA56 475 aaPredicted RBP14.3□□□□□ -0.12
SNX29-203ENST00000564111 ZUFSPQ96AP4 578 aa14.3□□□□□ -0.12
SNX29-203ENST00000564111 TXLNGQ9NUQ3 528 aa14.3□□□□□ -0.12
SNX29-203ENST00000564111 IL1RAPL1Q9NZN1 696 aa14.3□□□□□ -0.12
SNX29-203ENST00000564111 NBEAQ8NFP9 2946 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 DNALI1O14645 258 aaPredicted RBP14.29□□□□□ -0.12
SNX29-203ENST00000564111 SLC28A2O43868 658 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 C1orf105O95561 183 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 FMO4P31512 558 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 RRADP55042 308 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 CSE1LP55060 971 aaKnown RBP14.29□□□□□ -0.12
SNX29-203ENST00000564111 GPS2Q13227 327 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 SPANXN3Q5MJ09 141 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 CTSL3PQ5NE16 218 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 ANKRD22Q5VYY1 191 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 ZNF470Q6ECI4 717 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 RHBDD2Q6NTF9 364 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 DNAJC22Q8N4W6 341 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNX29-203ENST00000564111 FBXO15Q8NCQ5 510 aaPredicted RBP14.29□□□□□ -0.12
SNX29-203ENST00000564111 CFAP61Q8NHU2 1237 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 FLVCR1-AS1Q8TAF5 88 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 KCNJ9Q92806 393 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 VPS50Q96JG6 964 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 BIRC8Q96P09 236 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 NAPGQ99747 312 aaPredicted RBP14.29□□□□□ -0.12
SNX29-203ENST00000564111 NDC1Q9BTX1 674 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 SEMA4CQ9C0C4 833 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 PCMTD2Q9NV79 361 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 CORO1CQ9ULV4 474 aaPredicted RBP14.29□□□□□ -0.12
SNX29-203ENST00000564111 SNX7Q9UNH6 387 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 CFAP47Q6ZTR5 3102 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 ATRXP46100 2492 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 CHRM3P20309 590 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 PAFAH1B1P43034 410 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 ZNF789Q5FWF6 425 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 RNASEH2BQ5TBB1 312 aaKnown RBP14.29□□□□□ -0.12
SNX29-203ENST00000564111 GALNT7Q86SF2 657 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 LDB1Q86U70 411 aaPredicted RBP14.29□□□□□ -0.12
SNX29-203ENST00000564111 COG1Q8WTW3 980 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 LRRC39Q96DD0 335 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 PDLIM2Q96JY6 352 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 NDOR1Q9UHB4 597 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 KCNMB2Q9Y691 235 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 MAD1L1Q9Y6D9 718 aa14.29□□□□□ -0.12
SNX29-203ENST00000564111 ZSCAN9O15535 394 aaPredicted RBP14.28□□□□□ -0.12
SNX29-203ENST00000564111 MATN4O95460 622 aa14.28□□□□□ -0.12
SNX29-203ENST00000564111 MORF4L2Q15014 288 aa14.28□□□□□ -0.12
SNX29-203ENST00000564111 NCF4Q15080 339 aa14.28□□□□□ -0.12
SNX29-203ENST00000564111 CYP2A13Q16696 494 aa14.28□□□□□ -0.12
SNX29-203ENST00000564111 PAPD7Q5XG87 772 aaKnown RBP14.28□□□□□ -0.12
SNX29-203ENST00000564111 FBXO38Q6PIJ6 1188 aa14.28□□□□□ -0.12
SNX29-203ENST00000564111 KIAA0408Q6ZU52 694 aa14.28□□□□□ -0.12
SNX29-203ENST00000564111 VRK3Q8IV63 474 aa14.28□□□□□ -0.12
SNX29-203ENST00000564111 LMNTD1Q8N9Z9 388 aa14.28□□□□□ -0.12
SNX29-203ENST00000564111 FKBP10Q96AY3 582 aa14.28□□□□□ -0.12
SNX29-203ENST00000564111 CHST8Q9H2A9 424 aa14.28□□□□□ -0.12
SNX29-203ENST00000564111 KCNF1Q9H3M0 494 aa14.28□□□□□ -0.12
SNX29-203ENST00000564111 C20orf96Q9NUD7 363 aaPredicted RBP14.28□□□□□ -0.12
SNX29-203ENST00000564111 IRAK4Q9NWZ3 460 aa14.28□□□□□ -0.12
SNX29-203ENST00000564111 SPHK1Q9NYA1 384 aa14.28□□□□□ -0.12
SNX29-203ENST00000564111 IQCF5A8MTL0 148 aa14.27□□□□□ -0.12
SNX29-203ENST00000564111 ZNF749O43361 778 aa14.27□□□□□ -0.12
SNX29-203ENST00000564111 VPS26AO75436 327 aa14.27□□□□□ -0.12
SNX29-203ENST00000564111 PVRP15151 417 aa14.27□□□□□ -0.12
SNX29-203ENST00000564111 F8A1P23610 371 aa14.27□□□□□ -0.12
SNX29-203ENST00000564111 CMPK1P30085 196 aa14.27□□□□□ -0.12
SNX29-203ENST00000564111 ERV3-1Q14264 604 aa14.27□□□□□ -0.12
SNX29-203ENST00000564111 INPP5DQ92835 1189 aa14.27□□□□□ -0.12
SNX29-203ENST00000564111 MENTQ9BUN1 341 aa14.27□□□□□ -0.12
SNX29-203ENST00000564111 MRPS18BQ9Y676 258 aaKnown RBP14.27□□□□□ -0.12
SNX29-203ENST00000564111 MYO1CO00159 1063 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 PSIP1O75475 530 aaKnown RBP14.27□□□□□ -0.13
SNX29-203ENST00000564111 TPBGLP0DKB5 382 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 GABRA4P48169 554 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 GRM7Q14831 915 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 TCTN3Q6NUS6 607 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 FAM198BQ6UWH4 519 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 CENPUQ71F23 418 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 TRIM73Q86UV7 250 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 ENDOVQ8N8Q3 282 aaKnown RBP14.27□□□□□ -0.13
SNX29-203ENST00000564111 BBOF1Q8ND07 529 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 OR9A1PQ8NGU1 263 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 SMPDL3AQ92484 453 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 NACC2Q96BF6 587 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 PPM1MQ96MI6 270 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 TRMT1Q9NXH9 659 aaKnown RBP14.27□□□□□ -0.13
SNX29-203ENST00000564111 EURLQ9NYK6 297 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 PLAGL1Q9UM63 463 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 SAR1BQ9Y6B6 198 aa14.27□□□□□ -0.13
SNX29-203ENST00000564111 ZCWPW2A0A1B0GU75 182 aa14.26□□□□□ -0.13
SNX29-203ENST00000564111 PRPF4O43172 522 aaKnown RBP eCLIP14.26□□□□□ -0.13
SNX29-203ENST00000564111 SRPX2O60687 465 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms