RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SPESP1Q6UW49 350 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 TIPARPQ7Z3E1 657 aaKnown RBP8.26□□□□□ -1.09
UBR1-204ENST00000563239 TRIM73Q86UV7 250 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 KMT5CQ86Y97 462 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 RELL1Q8IUW5 271 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 FAM20CQ8IXL6 584 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 CARFQ8N187 725 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 C2orf73Q8N5S3 287 aaPredicted RBP8.26□□□□□ -1.09
UBR1-204ENST00000563239 OR2L8Q8NGY9 312 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 GABPB2Q8TAK5 448 aaPredicted RBP8.26□□□□□ -1.09
UBR1-204ENST00000563239 HMGCLL1Q8TB92 370 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 EEF1AKMT1Q8WVE0 214 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 SKA2Q8WVK7 121 aaPredicted RBP8.26□□□□□ -1.09
UBR1-204ENST00000563239 RAD51AP1Q96B01 352 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 TRAPPC9Q96Q05 1148 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 PKP4Q99569 1192 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 CCDC68Q9H2F9 335 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 C1GALT1Q9NS00 363 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 TAS2R13Q9NYV9 303 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 NINJ2Q9NZG7 142 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 ZFATQ9P243 1243 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 ADAMTS6Q9UKP5 1117 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 IKZF3Q9UKT9 509 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 CORO1CQ9ULV4 474 aaPredicted RBP8.26□□□□□ -1.09
UBR1-204ENST00000563239 BTRCQ9Y297 605 aa8.26□□□□□ -1.09
UBR1-204ENST00000563239 URB1O60287 2271 aaKnown RBP8.26□□□□□ -1.09
UBR1-204ENST00000563239 FAM95CA0A1B0GW59 222 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 EIF3FO00303 357 aaPredicted RBP8.25□□□□□ -1.09
UBR1-204ENST00000563239 EFSO43281 561 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 ZNF500O60304 480 aaPredicted RBP8.25□□□□□ -1.09
UBR1-204ENST00000563239 FAM155BO75949 473 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 TIAF1O95411 115 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 ZBTB11O95625 1053 aaPredicted RBP8.25□□□□□ -1.09
UBR1-204ENST00000563239 FGF5P12034 268 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 ENO3P13929 434 aaPredicted RBP8.25□□□□□ -1.09
UBR1-204ENST00000563239 ZNF28P17035 718 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 CDH3P22223 829 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 CCNFP41002 786 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 GABRA4P48169 554 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 RAB15P59190 212 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 YBX1P67809 324 aaKnown RBP8.25□□□□□ -1.09
UBR1-204ENST00000563239 HSD11B2P80365 405 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 TLE3Q04726 772 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 PRKAA1Q13131 559 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 SRSF6Q13247 344 aaKnown RBP8.25□□□□□ -1.09
UBR1-204ENST00000563239 FASTKQ14296 549 aaKnown RBP8.25□□□□□ -1.09
UBR1-204ENST00000563239 ZNF460Q14592 562 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 KIR2DS3Q14952 304 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 EFTUD2Q15029 972 aaKnown RBP eCLIP8.25□□□□□ -1.09
UBR1-204ENST00000563239 SLC5A12Q1EHB4 618 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 ZXDCQ2QGD7 858 aaPredicted RBP8.25□□□□□ -1.09
UBR1-204ENST00000563239 KBTBD12Q3ZCT8 623 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 DCAF12Q5T6F0 453 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 FAM45BPQ6NSW5 357 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 TAX1BP1Q86VP1 789 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 CEP97Q8IW35 865 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 SPACA3Q8IXA5 215 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 LRRC56Q8IYG6 542 aaPredicted RBP8.25□□□□□ -1.09
UBR1-204ENST00000563239 GPATCH11Q8N954 259 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 FBXO15Q8NCQ5 510 aaPredicted RBP8.25□□□□□ -1.09
UBR1-204ENST00000563239 ZNF248Q8NDW4 579 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 OR9A1PQ8NGU1 263 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 FAM45AQ8TCE6 357 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 FBF1Q8TES7 1133 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 IFT81Q8WYA0 676 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 ZNF501Q96CX3 271 aaPredicted RBP8.25□□□□□ -1.09
UBR1-204ENST00000563239 RNF31Q96EP0 1072 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 CRELD1Q96HD1 420 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 NAF1Q96HR8 494 aaKnown RBP8.25□□□□□ -1.09
UBR1-204ENST00000563239 VPS39Q96JC1 886 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 FOPNLQ96NB1 174 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 DCBLD2Q96PD2 775 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 OR6C1Q96RD1 312 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 FUT8Q9BYC5 575 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 ASPSCR1Q9BZE9 553 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 DPH1Q9BZG8 443 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 FAM129AQ9BZQ8 928 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 KLHL25Q9H0H3 589 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 RHOJQ9H4E5 214 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 FAM60AQ9NP50 221 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 WDR70Q9NW82 654 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 SPATA7Q9P0W8 599 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 TRMT6Q9UJA5 497 aaKnown RBP8.25□□□□□ -1.09
UBR1-204ENST00000563239 PILRAQ9UKJ1 303 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 KLHL20Q9Y2M5 609 aa8.25□□□□□ -1.09
UBR1-204ENST00000563239 MTO1Q9Y2Z2 717 aaKnown RBP8.25□□□□□ -1.09
UBR1-204ENST00000563239 SDK2Q58EX2 2172 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 A0A0J9YY10 115 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 TEX51A0A1B0GUA7 166 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 HMX2A2RU54 273 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 ISM1B1AKI9 464 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 H3BMH7 237 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 POLR1CO15160 346 aaPredicted RBP8.24□□□□□ -1.09
UBR1-204ENST00000563239 KDM1AO60341 852 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 DLGAP3O95886 979 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 SLC16A8O95907 504 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 CATP04040 527 aaKnown RBP8.24□□□□□ -1.09
UBR1-204ENST00000563239 CTSBP07858 339 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 RHOXF2BP0C7M4 288 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 MSL3P1P0C860 447 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms