RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CNTFP26441 200 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 PRDX3P30048 256 aaKnown RBP12.98□□□□□ -0.33
CDH1-204ENST00000562118 SERPINB9P50453 376 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 AP1S2P56377 157 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 CDKL1Q00532 357 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 SLC29A2Q14542 456 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 PHKG1Q16816 387 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 ERCC6LQ2NKX8 1250 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 EMBQ6PCB8 327 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 ADGRD1Q6QNK2 874 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 RAB11FIP2Q7L804 512 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 MYO1HQ8N1T3 1032 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 D2HGDHQ8N465 521 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 MREGQ8N565 214 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 AGBL5Q8NDL9 886 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 RCBTB1Q8NDN9 531 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 SLC46A1Q96NT5 459 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 TGM7Q96PF1 710 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 PKP4Q99569 1192 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 MAP3K3Q99759 626 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 CMKLR1Q99788 373 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 SYNDIG1Q9H7V2 258 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 PARVBQ9HBI1 364 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 FBXO8Q9NRD0 319 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 SLC39A10Q9ULF5 831 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 PLAGL1Q9UM63 463 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 LOXL2Q9Y4K0 774 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 PCDHGA7Q9Y5G6 932 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 APC2O95996 2303 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 ANKRD11Q6UB99 2663 aaPredicted RBP12.97□□□□□ -0.33
CDH1-204ENST00000562118 SDK2Q58EX2 2172 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 PIPSLA2A3N6 862 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 KRT87PA6NCN2 255 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 E7ENX8 843 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 ZBTB14O43829 449 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 SLC16A8O95907 504 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 TUBBP07437 444 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 FGF3P11487 239 aaPredicted RBP12.97□□□□□ -0.33
CDH1-204ENST00000562118 UGT2B7P16662 529 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 STMN1P16949 149 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 MPSTP25325 297 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 IMPA1P29218 277 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 CRABP2P29373 138 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 GABRA4P48169 554 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 ERVPABLB-1P60509 514 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 MC2RQ01718 297 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 TAP2Q03519 686 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 USP10Q14694 798 aaKnown RBP12.97□□□□□ -0.33
CDH1-204ENST00000562118 ZXDCQ2QGD7 858 aaPredicted RBP12.97□□□□□ -0.33
CDH1-204ENST00000562118 CDKL4Q5MAI5 379 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 PHF19Q5T6S3 580 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 IRGCQ6NXR0 463 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 TTC23LQ6PF05 361 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 TIFABQ6ZNK6 161 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 UBE2R2Q712K3 238 aaPredicted RBP12.97□□□□□ -0.33
CDH1-204ENST00000562118 TDRPQ86YL5 185 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 KLHDC8AQ8IYD2 350 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 CENPLQ8N0S6 344 aaPredicted RBP12.97□□□□□ -0.33
CDH1-204ENST00000562118 LSMEM2Q8N112 164 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 LMNTD1Q8N9Z9 388 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 CFAP61Q8NHU2 1237 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 MZB1Q8WU39 189 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 ZNF480Q8WV37 535 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 SLC22A18Q96BI1 424 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 IL17FQ96PD4 163 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 DDA1Q9BW61 102 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 SPRY4Q9C004 299 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 PPCSQ9HAB8 311 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 GPAMQ9HCL2 828 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 TDRKHQ9Y2W6 561 aaKnown RBP12.97□□□□□ -0.33
CDH1-204ENST00000562118 USP24Q9UPU5 2620 aa12.97□□□□□ -0.33
CDH1-204ENST00000562118 TMEM8BA6NDV4 472 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.96□□□□□ -0.33
CDH1-204ENST00000562118 H3BMH7 237 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 NVLO15381 856 aaKnown RBP12.96□□□□□ -0.33
CDH1-204ENST00000562118 PHGDHO43175 533 aaKnown RBP12.96□□□□□ -0.33
CDH1-204ENST00000562118 ZBTB11O95625 1053 aaPredicted RBP12.96□□□□□ -0.33
CDH1-204ENST00000562118 NUDT17P0C025 328 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 CD1DP15813 335 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 CYP2A7P20853 494 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 ETV5P41161 510 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 PNLIPRP1P54315 467 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 GABREP78334 506 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 DLG1Q12959 904 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 PRKAA1Q13131 559 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 CACHD1Q5VU97 1274 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 FAM92BQ6ZTR7 304 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 CMC1Q7Z7K0 106 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 ADAMTSL2Q86TH1 951 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 FBXO39Q8N4B4 442 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 KDF1Q8NAX2 398 aaPredicted RBP12.96□□□□□ -0.33
CDH1-204ENST00000562118 OR2A1Q8NGT9 310 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 SKA2Q8WVK7 121 aaPredicted RBP12.96□□□□□ -0.33
CDH1-204ENST00000562118 CCDC138Q96M89 665 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 PPM1MQ96MI6 270 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 GPR78Q96P69 363 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 TRAPPC9Q96Q05 1148 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 SGPP1Q9BX95 441 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 PARD6BQ9BYG5 372 aa12.96□□□□□ -0.33
CDH1-204ENST00000562118 SNX15Q9NRS6 342 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms