RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	ZNF771	Q7L3S4	317 aa	Predicted RBP	5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	ADCK2	Q7Z695	626 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	ANKRD23	Q86SG2	305 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	EXOC3L1	Q86VI1	746 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	GPALPP1	Q8IXQ4	340 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	CIART	Q8N365	385 aa	Predicted RBP	5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	ANKRD13C	Q8N6S4	541 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	MAB21L3	Q8N8X9	362 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	TRIML1	Q8N9V2	468 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	C9orf106	Q8NAJ2	232 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	SSMEM1	Q8WWF3	244 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	ANP32B	Q92688	251 aa	Known RBP	5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	STAMBPL1	Q96FJ0	436 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	CPNE1	Q99829	537 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	RSPH9	Q9H1X1	276 aa	Predicted RBP	5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	FZD8	Q9H461	694 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	CPSF3	Q9UKF6	684 aa	Known RBP	5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	MTUS1	Q9ULD2	1270 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	NOL7	Q9UMY1	257 aa	Known RBP	5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	SHPRH	Q149N8	1683 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	ZC3H13	Q5T200	1668 aa	Known RBP	5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	CTTNBP2	Q8WZ74	1663 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	NWD1	Q149M9	1564 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	KDM5D	Q9BY66	1539 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	NUP153	P49790	1475 aa	Known RBP	5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	LRRC9	Q6ZRR7	1453 aa		5.07	□□□□□ -1.6
TCF12-223	ENST00000561235	ITSN2	Q9NZM3	1697 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235		A0A1W2PRB8	838 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235		E9PI62	339 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	GAPDHS	O14556	408 aa	Predicted RBP	5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	BUB3	O43684	328 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	CETP	P11597	493 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	EPHA2	P29317	976 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	PRKCI	P41743	596 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	LIMK1	P53667	647 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	ERVFC1-1	P60608	527 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	CX3CL1	P78423	397 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	SCARB2	Q14108	478 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	PHLDA2	Q53GA4	152 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	SYT14P1	Q58G82	188 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	HECTD3	Q5T447	861 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	LRCH2	Q5VUJ6	765 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	PRR27	Q6MZM9	219 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	LINGO4	Q6UY18	593 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	C9orf139	Q6ZV77	190 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	NUP54	Q7Z3B4	507 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	ARHGAP22	Q7Z5H3	698 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	MAML2	Q8IZL2	1156 aa	Predicted RBP	5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	SLC24A4	Q8NFF2	622 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	DMBX1	Q8NFW5	382 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	OLIG1	Q8TAK6	271 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	ZNF473	Q8WTR7	871 aa	Known RBP	5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	EXT2	Q93063	718 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	LRRC3B	Q96PB8	259 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	FEV	Q99581	238 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	MGME1	Q9BQP7	344 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	ADPGK	Q9BRR6	497 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	ARRDC1-AS1	Q9H2J1	176 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	UPF2	Q9HAU5	1272 aa	Known RBP	5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	TCF7L2	Q9NQB0	619 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	SERINC1	Q9NRX5	453 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	DONSON	Q9NYP3	566 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	TAAR2	Q9P1P5	351 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	LRWD1	Q9UFC0	647 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	JRKL	Q9Y4A0	524 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	CEP350	Q5VT06	3117 aa		5.06	□□□□□ -1.6
TCF12-223	ENST00000561235	PCDH11Y	Q9BZA8	1340 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	ARHGEF37	A1IGU5	675 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	NEMP2	A6NFY4	417 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	OR6C76	A6NM76	312 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	PRR32	B1ATL7	298 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	CLIC2	O15247	247 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	KCNAB3	O43448	404 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	XPNPEP2	O43895	674 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	MARK3	P27448	753 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	TKT	P29401	623 aa	Known RBP	5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	LHX1	P48742	406 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	HOXA1	P49639	335 aa	Predicted RBP	5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	GAGE5	Q13069	117 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	GAGE6	Q13070	117 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	KIAA1161	Q6NSJ0	714 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	GLRX5	Q86SX6	157 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	METTL23	Q86XA0	190 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	NPEPL1	Q8NDH3	523 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	ALG14	Q96F25	216 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	SGK494	Q96LW2	274 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	PSD2	Q9BQI7	771 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	KATNB1	Q9BVA0	655 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	S1PR5	Q9H228	398 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	GRPEL1	Q9HAV7	217 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	A4GALT	Q9NPC4	353 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	ZNF112	Q9UJU3	913 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	MAP3K1	Q13233	1512 aa		5.05	□□□□□ -1.6
TCF12-223	ENST00000561235	KIDINS220	Q9ULH0	1771 aa		5.04	□□□□□ -1.6
TCF12-223	ENST00000561235	CLDN4	O14493	209 aa		5.04	□□□□□ -1.6
TCF12-223	ENST00000561235	AP5Z1	O43299	807 aa		5.04	□□□□□ -1.6
TCF12-223	ENST00000561235	IGHV2-70	P01814	119 aa		5.04	□□□□□ -1.6
TCF12-223	ENST00000561235	AMD1	P17707	334 aa		5.04	□□□□□ -1.6
TCF12-223	ENST00000561235	JAK1	P23458	1154 aa		5.04	□□□□□ -1.6
TCF12-223	ENST00000561235	EEF1B2	P24534	225 aa	Known RBP	5.04	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms