RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 XKR8Q9H6D3 395 aa10.87□□□□□ -0.67
BMP4-204ENST00000558961 LHX9Q9NQ69 397 aa10.87□□□□□ -0.67
BMP4-204ENST00000558961 INTS10Q9NVR2 710 aaKnown RBP10.87□□□□□ -0.67
BMP4-204ENST00000558961 WDR70Q9NW82 654 aa10.87□□□□□ -0.67
BMP4-204ENST00000558961 SOHLH2Q9NX45 425 aa10.87□□□□□ -0.67
BMP4-204ENST00000558961 SAMD15Q9P1V8 674 aa10.87□□□□□ -0.67
BMP4-204ENST00000558961 MTRF1LQ9UGC7 380 aaKnown RBP10.87□□□□□ -0.67
BMP4-204ENST00000558961 IL17BQ9UHF5 180 aa10.87□□□□□ -0.67
BMP4-204ENST00000558961 LNPEPQ9UIQ6 1025 aa10.87□□□□□ -0.67
BMP4-204ENST00000558961 PCDHB3Q9Y5E6 796 aa10.87□□□□□ -0.67
BMP4-204ENST00000558961 FER1L5A0AVI2 2057 aa10.87□□□□□ -0.67
BMP4-204ENST00000558961 CFAP46Q8IYW2 2715 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 SDR42E2A6NKP2 422 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 C21orf140B9A014 251 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 H3BMH7 237 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 H3BMM5 538 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 PFDN6O15212 129 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 EIF3HO15372 352 aaKnown RBP eCLIP10.86□□□□□ -0.67
BMP4-204ENST00000558961 CPNE3O75131 537 aaKnown RBP10.86□□□□□ -0.67
BMP4-204ENST00000558961 USP1O94782 785 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 UGT2B7P16662 529 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 ITGB6P18564 788 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 PEBP1P30086 187 aaKnown RBP10.86□□□□□ -0.67
BMP4-204ENST00000558961 GABRA4P48169 554 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 RAB28P51157 221 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 EIF3BP55884 814 aaKnown RBP10.86□□□□□ -0.67
BMP4-204ENST00000558961 MC1RQ01726 317 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 DHX9Q08211 1270 aaKnown RBP10.86□□□□□ -0.67
BMP4-204ENST00000558961 C19orf57Q0VDD7 668 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 ABRQ12979 859 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 COL9A2Q14055 689 aaPredicted RBP10.86□□□□□ -0.67
BMP4-204ENST00000558961 KIR2DS3Q14952 304 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 KYNUQ16719 465 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 SLC5A12Q1EHB4 618 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 ANKRD20A4Q4UJ75 823 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 TRMT10CQ7L0Y3 403 aaKnown RBP10.86□□□□□ -0.67
BMP4-204ENST00000558961 SDCCAG8Q86SQ7 713 aaPredicted RBP10.86□□□□□ -0.67
BMP4-204ENST00000558961 LMNTD2Q8IXW0 634 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 EXD3Q8N9H8 876 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 C19orf47Q8N9M1 422 aaKnown RBP10.86□□□□□ -0.67
BMP4-204ENST00000558961 LINC01555Q8NAE3 123 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 ELMO2Q96JJ3 720 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 SIGLEC10Q96LC7 697 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 SH3GL2Q99962 352 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 WDR83Q9BRX9 315 aaKnown RBP10.86□□□□□ -0.67
BMP4-204ENST00000558961 TRIM56Q9BRZ2 755 aaKnown RBP10.86□□□□□ -0.67
BMP4-204ENST00000558961 ADNPQ9H2P0 1102 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 FANCEQ9HB96 536 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 SPHK1Q9NYA1 384 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 KCND3Q9UK17 655 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 CROTQ9UKG9 612 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 VPS9D1Q9Y2B5 631 aa10.86□□□□□ -0.67
BMP4-204ENST00000558961 A0A0J9YY10 115 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 GOLGA8KD6RF30 607 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 GOLGA8TH3BQL2 631 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 GOLGA8MH3BSY2 632 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 NIPSNAP2O75323 286 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 SCRG1O75711 98 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 MATN4O95460 622 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 NUDT17P0C025 328 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 PVRP15151 417 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 OAS2P29728 719 aaKnown RBP10.85□□□□□ -0.67
BMP4-204ENST00000558961 RORAP35398 523 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 DLSTP36957 453 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 PMS2P54278 862 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 CSE1LP55060 971 aaKnown RBP10.85□□□□□ -0.67
BMP4-204ENST00000558961 GPS2Q13227 327 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 DNASE1L3Q13609 305 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 NEPROQ6NW34 567 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 CASC4Q6P4E1 433 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 BORAQ6PGQ7 559 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 LRIG3Q6UXM1 1119 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 CDHR3Q6ZTQ4 885 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 CEP128Q6ZU80 1094 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 OTOAQ7RTW8 1153 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 TMEM126BQ8IUX1 230 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 SLC38A9Q8NBW4 561 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 OR1L3Q8NH93 324 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 HMGCLL1Q8TB92 370 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 CT55Q8WUE5 264 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 ZNF669Q96BR6 464 aaPredicted RBP10.85□□□□□ -0.67
BMP4-204ENST00000558961 TCTN2Q96GX1 697 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 PWWP2AQ96N64 755 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 TMEM109Q9BVC6 243 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 RAB11FIP5Q9BXF6 653 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 TUBD1Q9UJT1 453 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 PADI1Q9ULC6 663 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 TDRKHQ9Y2W6 561 aaKnown RBP10.85□□□□□ -0.67
BMP4-204ENST00000558961 MED16Q9Y2X0 877 aa10.85□□□□□ -0.67
BMP4-204ENST00000558961 SPTBP11277 2137 aa10.84□□□□□ -0.67
BMP4-204ENST00000558961 RASGRF2O14827 1237 aa10.84□□□□□ -0.67
BMP4-204ENST00000558961 NKX2-8O15522 239 aa10.84□□□□□ -0.67
BMP4-204ENST00000558961 RIPK2O43353 540 aa10.84□□□□□ -0.67
BMP4-204ENST00000558961 PRICKLE3O43900 615 aaPredicted RBP10.84□□□□□ -0.67
BMP4-204ENST00000558961 FKBP9O95302 570 aa10.84□□□□□ -0.67
BMP4-204ENST00000558961 C1orf105O95561 183 aa10.84□□□□□ -0.67
BMP4-204ENST00000558961 TTC4O95801 387 aa10.84□□□□□ -0.67
BMP4-204ENST00000558961 S1PR4O95977 384 aa10.84□□□□□ -0.67
BMP4-204ENST00000558961 FAM87AP0C7U9 286 aa10.84□□□□□ -0.67
BMP4-204ENST00000558961 CCNYL3P0C7X3 344 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms