RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SCIMPQ6UWF3 145 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 C16orf89Q6UX73 402 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 TRIM46Q7Z4K8 759 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 SYTL1Q8IYJ3 562 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 DEFB123Q8N688 67 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 KYQ8NBH2 561 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 FLCNQ8NFG4 579 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 TSTD1Q8NFU3 115 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 OR2T11Q8NH01 316 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 ZNF480Q8WV37 535 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 TFGQ92734 400 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-233ENST00000557529 USP7Q93009 1102 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 MED8Q96G25 268 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 SLC25A23Q9BV35 468 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 EFCAB1Q9HAE3 211 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 FZD3Q9NPG1 666 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 SDR39U1Q9NRG7 319 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-233ENST00000557529 AIG1Q9NVV5 245 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 EBF1Q9UH73 591 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 FBXL21Q9UKT6 434 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 KCNE2Q9Y6J6 123 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 KCNE1BA0A087WTH5 132 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 SERTM1A2A2V5 107 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 ZNF839A8K0R7 811 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 MEI4A8MW99 385 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 MGRN1O60291 552 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 APBB3O95704 486 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 SNRPB2P08579 225 aaKnown RBP12.12□□□□□ -0.47
SHMT2-233ENST00000557529 JUPP14923 745 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 PCSK2P16519 638 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 IDSP22304 550 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 GPX3P22352 226 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 CCND1P24385 295 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 HTR1BP28222 390 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 NUDT1P36639 197 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 HNF4AP41235 474 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 HALP42357 657 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 STARD6P59095 220 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 EMX2Q04743 252 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 CHIT1Q13231 466 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 RIPK1Q13546 671 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 ARHGAP19Q14CB8 494 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 NR6A1Q15406 480 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 IMPG1Q17R60 797 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 PDCD4Q53EL6 469 aaKnown RBP12.12□□□□□ -0.47
SHMT2-233ENST00000557529 Q6ZSR9 355 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 CHST15Q7LFX5 561 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-233ENST00000557529 PARP9Q8IXQ6 854 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 SFRP1Q8N474 314 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 FNDC5Q8NAU1 212 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 FBXO27Q8NI29 283 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 OR2M4Q96R27 311 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 MYOCQ99972 504 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 SGPP1Q9BX95 441 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 MRPL1Q9BYD6 325 aaKnown RBP12.12□□□□□ -0.47
SHMT2-233ENST00000557529 RASSF4Q9H2L5 321 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 TRIT1Q9H3H1 467 aaKnown RBP12.12□□□□□ -0.47
SHMT2-233ENST00000557529 ELOVL6Q9H5J4 265 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 LTB4R2Q9NPC1 389 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 CD93Q9NPY3 652 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 TM7SF3Q9NS93 570 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 INTS7Q9NVH2 962 aaKnown RBP12.12□□□□□ -0.47
SHMT2-233ENST00000557529 GIMAP2Q9UG22 337 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 MOSPD1Q9UJG1 213 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 ZNF490Q9ULM2 529 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-233ENST00000557529 DYRK1BQ9Y463 629 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 GPR45Q9Y5Y3 372 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 HS3ST3A1Q9Y663 406 aa12.12□□□□□ -0.47
SHMT2-233ENST00000557529 KRT87PA6NCN2 255 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 BBIP1A8MTZ0 92 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 C10orf142B7Z368 130 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 TNFRSF10CO14798 259 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 AIM2O14862 343 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 LSM1O15116 133 aaKnown RBP12.11□□□□□ -0.47
SHMT2-233ENST00000557529 PI15O43692 258 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 ZNF217O75362 1048 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 WFS1O76024 890 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 GNAZP19086 355 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 ITGAXP20702 1163 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 CASP2P42575 452 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 GNPDA1P46926 289 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 NUDT2P50583 147 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 CLCNKAP51800 687 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 RAP1GDS1P52306 607 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 PNLIPRP1P54315 467 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 TBPL1P62380 186 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 YPEL5P62699 121 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 SLC25A3Q00325 362 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 ART3Q13508 389 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 UBXN2BQ14CS0 331 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 CPSF6Q16630 551 aaKnown RBP eCLIP12.11□□□□□ -0.47
SHMT2-233ENST00000557529 AP5B1Q2VPB7 878 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 XKR6Q5GH73 641 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 WASHC2DQ5SRD0 308 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 FRG2Q64ET8 278 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 KIAA0895LQ68EN5 471 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 CAPRIN2Q6IMN6 1127 aaKnown RBP12.11□□□□□ -0.47
SHMT2-233ENST00000557529 GRHL2Q6ISB3 625 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 ANO7Q6IWH7 933 aa12.11□□□□□ -0.47
SHMT2-233ENST00000557529 GK5Q6ZS86 529 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms