RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 NIPA1Q7RTP0 329 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 OR5K1Q8NHB7 308 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 SHKBP1Q8TBC3 707 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 RNF128Q8TEB7 428 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 AZIN2Q96A70 460 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 FTHL17Q9BXU8 183 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 NUP214P35658 2090 aaPredicted RBP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ITGA5P08648 1049 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 PSMA6P60900 246 aaKnown RBP8.67□□□□□ -1.02
SYNE3-205ENST00000557275 ITPK1Q13572 414 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 BAATQ14032 418 aaPredicted RBP8.67□□□□□ -1.02
SYNE3-205ENST00000557275 SLC27A1Q6PCB7 646 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 SMG8Q8ND04 991 aaKnown RBP8.67□□□□□ -1.02
SYNE3-205ENST00000557275 SNTG1Q9NSN8 517 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 ADAM10O14672 748 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 MSCO60682 206 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 PARP15Q460N3 678 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 RAP1GAP2Q684P5 730 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 NCEH1Q6PIU2 408 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 ARL9Q6T311 187 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 BEST4Q8NFU0 473 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 RRNAD1Q96FB5 475 aaKnown RBP8.67□□□□□ -1.02
SYNE3-205ENST00000557275 HACL1Q9UJ83 578 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 SLC25A14O95258 325 aaPredicted RBP8.67□□□□□ -1.02
SYNE3-205ENST00000557275 MT-ND5P03915 603 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 KDELR1P24390 212 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 AVPR1BP47901 424 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 KCNJ2P63252 427 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 MLC1Q15049 377 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 CBR4Q8N4T8 237 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 DUSP16Q9BY84 665 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 SLCO1B3Q9NPD5 702 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 TMEM94Q12767 1356 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 GXYLT2A0PJZ3 443 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 PLGP00747 810 aaPredicted RBP8.67□□□□□ -1.02
SYNE3-205ENST00000557275 LPLP06858 475 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 CD36P16671 472 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 CLCN4P51793 760 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 PRMT2P55345 433 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 SPIN4Q56A73 249 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 NT5DC1Q5TFE4 455 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 PRPF38BQ5VTL8 546 aaKnown RBP8.67□□□□□ -1.02
SYNE3-205ENST00000557275 CDKAL1Q5VV42 579 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 FAM198BQ6UWH4 519 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 BRSK1Q8TDC3 778 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 LINGO1Q96FE5 620 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 MTG2Q9H4K7 406 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 COMMD3Q9UBI1 195 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 PTPRJQ12913 1337 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 ERVK-7P63135 1459 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 RDH16O75452 317 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 PRDX5P30044 214 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 RALGPS1Q5JS13 557 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 CUZD1Q86UP6 607 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 LGI2Q8N0V4 545 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 SPIN2AQ99865 258 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 SPIN2BQ9BPZ2 258 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 CBY1Q9Y3M2 126 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 ERVK-24P63145 666 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 MKRN4PQ13434 485 aaPredicted RBP8.67□□□□□ -1.02
SYNE3-205ENST00000557275 SCARB2Q14108 478 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 ARHGAP11AQ6P4F7 1023 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 TMCO2Q7Z6W1 182 aaPredicted RBP8.67□□□□□ -1.02
SYNE3-205ENST00000557275 MCMBPQ9BTE3 642 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 HCN2Q9UL51 889 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 FBXO7Q9Y3I1 522 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 ATG4BQ9Y4P1 393 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 NCANO14594 1321 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 CTHP32929 405 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 FKBP10Q96AY3 582 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 FCRL2Q96LA5 508 aaPredicted RBP8.67□□□□□ -1.02
SYNE3-205ENST00000557275 CNTNAP5Q8WYK1 1306 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 MAP2K7O14733 419 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 PAPSS1O43252 624 aaPredicted RBP8.67□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF132P52740 706 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 ESX1Q8N693 406 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 IGDCC4Q8TDY8 1250 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 OR8D1Q8WZ84 308 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 ADAM7Q9H2U9 754 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF490Q9ULM2 529 aaPredicted RBP8.67□□□□□ -1.02
SYNE3-205ENST00000557275 TOR1AO14656 332 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 COQ9O75208 318 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 MATN1P21941 496 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 UNC5AQ6ZN44 842 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 ABHD13Q7L211 337 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 MFSD3Q96ES6 412 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 ERVW-1Q9UQF0 538 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 LOC100509620A0A075B734 347 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 UBFD1O14562 309 aaKnown RBP8.67□□□□□ -1.02
SYNE3-205ENST00000557275 PIP5K1BO14986 540 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 DBPQ10586 325 aaPredicted RBP8.67□□□□□ -1.02
SYNE3-205ENST00000557275 POLEQ07864 2286 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 USP32Q8NFA0 1604 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 FAM86B1E9PN63 330 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 AMHP03971 560 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 FAM86B2P0C5J1 330 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 CPN2P22792 545 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 DPP6P42658 865 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 AMHR2Q16671 573 aa8.67□□□□□ -1.02
SYNE3-205ENST00000557275 CHRFAM7AQ494W8 412 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms