RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 TBX21Q9UL17 535 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 RAB23Q9ULC3 237 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 LOC285095A0A1B0GVY8 99 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 CDK4P11802 303 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 ATP6V1E1P36543 226 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 ALDH6A1Q02252 535 aaKnown RBP11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 ZNF33AQ06730 810 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 NFE2L1Q14494 772 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 GPNMBQ14956 572 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 C6orf183Q5T699 404 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 CELF5Q8N6W0 485 aaKnown RBP11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 C17orf50Q8WW18 174 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 ARMC5Q96C12 935 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 EGLN2Q96KS0 407 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 RASSF1Q9NS23 344 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 UBAP1Q9NZ09 502 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 SNX5Q9Y5X3 404 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 OR1F1O43749 312 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 CTSEP14091 401 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 AOC1P19801 751 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 CDH15P55291 814 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 ERVK-21P61565 698 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 HSPB3Q12988 150 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 FAM98BQ52LJ0 330 aaKnown RBP11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 INO80DQ53TQ3 878 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 C6orf136Q5SQH8 315 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 KLHL35Q6PF15 583 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 TXNDC11Q6PKC3 985 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 TMEM132CQ8N3T6 1108 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 C1orf52Q8N6N3 182 aaKnown RBP11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 ASB2Q96Q27 587 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 PKMYT1Q99640 499 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 RC3H2Q9HBD1 1191 aaKnown RBP11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 NDOR1Q9UHB4 597 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 TAC3Q9UHF0 121 aa11.94□□□□□ -0.5
ARHGEF40-206ENST00000555232 FOXD2O60548 495 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 CST1P01037 141 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 PRLP01236 227 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 IGLV3-25P01717 112 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 SLC16A1P53985 500 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 C2orf80Q0P641 193 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 TRIM25Q14258 630 aaKnown RBP11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 PDGFRLQ15198 375 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 NADK2Q4G0N4 442 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 MANEALQ5VSG8 457 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 PPP4R4Q6NUP7 873 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 CCDC80Q76M96 950 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 BNIPLQ7Z465 357 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 HERVK_113Q902F9 699 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 KCNJ9Q92806 393 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 CARS2Q9HA77 564 aaKnown RBP11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 SELENONQ9NZV5 590 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 STK39Q9UEW8 545 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 PAPPA2Q9BXP8 1791 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 C15orf38-AP3S2A0A0A6YYH1 394 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 UBFD1O14562 309 aaKnown RBP11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 EPN2O95208 641 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 VNN2O95498 520 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 GRK3P35626 688 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 IST1P53990 364 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 C1orf61Q13536 156 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 ARPINQ7Z6K5 226 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 LSMEM2Q8N112 164 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 TMEM145Q8NBT3 493 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 BPIFB6Q8NFQ5 453 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 GIPC3Q8TF64 312 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 GSTO2Q9H4Y5 243 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 EXOSC4Q9NPD3 245 aaKnown RBP11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 COMMD8Q9NX08 183 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 LHX3Q9UBR4 397 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 FBXW2Q9UKT8 454 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 DHRS7Q9Y394 339 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 SMIM31A0A1B0GVY4 71 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 MID1O15344 667 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 FDXRP22570 491 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 HOXC8P31273 242 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 KIR3DL1P43629 444 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 CHN2P52757 468 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 MADCAM1Q13477 382 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 MRPL58Q14197 206 aaKnown RBP11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 TMEM53Q6P2H8 277 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 HEATR4Q86WZ0 1026 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 AHI1Q8N157 1196 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 ZNF555Q8NEP9 628 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 VANGL1Q8TAA9 524 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 NUS1Q96E22 293 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 BBS4Q96RK4 519 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 TRMT61BQ9BVS5 477 aaKnown RBP11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 PTTG2Q9NZH5 202 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 WDR37Q9Y2I8 494 aa11.93□□□□□ -0.5
ARHGEF40-206ENST00000555232 DFNA5O60443 496 aa11.92□□□□□ -0.5
ARHGEF40-206ENST00000555232 PAPSS2O95340 614 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF40-206ENST00000555232 HOXD12P35452 270 aa11.92□□□□□ -0.5
ARHGEF40-206ENST00000555232 ACTR1BP42025 376 aa11.92□□□□□ -0.5
ARHGEF40-206ENST00000555232 RPL34P49207 117 aaKnown RBP11.92□□□□□ -0.5
ARHGEF40-206ENST00000555232 ACTR1AP61163 376 aa11.92□□□□□ -0.5
ARHGEF40-206ENST00000555232 SLBPQ14493 270 aaKnown RBP eCLIP11.92□□□□□ -0.5
ARHGEF40-206ENST00000555232 TNFAIP8L2Q6P589 184 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF40-206ENST00000555232 AGTRAPQ6RW13 159 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms