RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 KCNA5P22460 613 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 PRKACGP22612 351 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 CAPZA2P47755 286 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 CLCN7P51798 805 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 ORC1Q13415 861 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 NFYCQ13952 458 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 SGCAQ16586 387 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.34□□□□□ -0.91
SIX4-202ENST00000554079 CYP27C1Q4G0S4 372 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 GNASQ5JWF2 1037 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 HEATR6Q6AI08 1181 aaKnown RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 BLOC1S3Q6QNY0 202 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 TMPRSS11AQ6ZMR5 421 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 RRM2BQ7LG56 351 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 GLCCI1Q86VQ1 547 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 RNF130Q86XS8 419 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 MIER2Q8N344 545 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 DTWD1Q8N5C7 304 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 ITFG1Q8TB96 612 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 ZNF431Q8TF32 576 aaPredicted RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 PIGBQ92521 554 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 ZNF669Q96BR6 464 aaPredicted RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 CELF6Q96J87 481 aaKnown RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 QKIQ96PU8 341 aaKnown RBP eCLIP9.34□□□□□ -0.91
SIX4-202ENST00000554079 CYP2S1Q96SQ9 504 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 OMDQ99983 421 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 CHCHD6Q9BRQ6 235 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 TMEM245Q9H330 911 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 SDHAF2Q9NX18 166 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 CYTH4Q9UIA0 394 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 KLF15Q9UIH9 416 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 CDH9Q9ULB4 789 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 OGDHLQ9ULD0 1010 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 SLC39A10Q9ULF5 831 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 MINPP1Q9UNW1 487 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 ZFR2Q9UPR6 939 aaKnown RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 BAIAP2Q9UQB8 552 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 RPH3AQ9Y2J0 694 aaPredicted RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 TMX2Q9Y320 296 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 ZCWPW2A0A1B0GU75 182 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 FAM170BA6NMN3 283 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 INPPL1O15357 1258 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 FABP7O15540 132 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 SEC22BO75396 215 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 ATP6AP2O75787 350 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 PGK1P00558 417 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 HIBADHP31937 336 aaKnown RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 BAG6P46379 1132 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 ZFP36L2P47974 494 aaKnown RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 RAB13P51153 203 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 CLDN20P56880 219 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 PSPHP78330 225 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 EMX2Q04743 252 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 RELQ04864 619 aaPredicted RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 DENND1BQ6P3S1 775 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 RPS27LQ71UM5 84 aaKnown RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 GPR155Q7Z3F1 870 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 XYLT1Q86Y38 959 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 PHYKPLQ8IUZ5 450 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 LAX1Q8IWV1 398 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 CHPFQ8IZ52 775 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 TMEM161BQ8NDZ6 487 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 OR5T2Q8NGG2 359 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 BTN2A2Q8WVV5 523 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 DPCDQ9BVM2 203 aaPredicted RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 GALNT9Q9HCQ5 603 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 KCNH7Q9NS40 1196 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 LYARQ9NX58 379 aaKnown RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 SMPD4Q9NXE4 827 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 MAP3K20Q9NYL2 800 aaKnown RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 TFCP2L1Q9NZI6 479 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 EVLQ9UI08 416 aaPredicted RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 KIF25Q9UIL4 384 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 UTS2RQ9UKP6 389 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 MKL2Q9ULH7 1088 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 NDRG4Q9ULP0 352 aaKnown RBP9.34□□□□□ -0.91
SIX4-202ENST00000554079 PKP3Q9Y446 797 aa9.34□□□□□ -0.91
SIX4-202ENST00000554079 DOCK5Q9H7D0 1870 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 NEMP2A6NFY4 417 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 E9PAM4 449 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 WWP2O00308 870 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 PROM1O43490 865 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 WBP4O75554 376 aaKnown RBP9.33□□□□□ -0.92
SIX4-202ENST00000554079 ATG7O95352 703 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 CFDP00746 253 aaPredicted RBP9.33□□□□□ -0.92
SIX4-202ENST00000554079 ARSBP15848 533 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 NPR1P16066 1061 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 PFKLP17858 780 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 ATP5F1P24539 256 aaPredicted RBP9.33□□□□□ -0.92
SIX4-202ENST00000554079 HLA-FP30511 346 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 GPC1P35052 558 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 AVPR1AP37288 418 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 HUNKP57058 714 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 DAB2P98082 770 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 CREMQ03060 361 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 PPP1R8Q12972 351 aaKnown RBP9.33□□□□□ -0.92
SIX4-202ENST00000554079 RPA4Q13156 261 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 GRM1Q13255 1194 aa9.33□□□□□ -0.92
SIX4-202ENST00000554079 USP10Q14694 798 aaKnown RBP9.33□□□□□ -0.92
SIX4-202ENST00000554079 PTPRRQ15256 657 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms