RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 PKP4Q99569 1192 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 PARVBQ9HBI1 364 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 ASCL3Q9NQ33 180 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 FBXO8Q9NRD0 319 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 SPHK1Q9NYA1 384 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 CIDEBQ9UHD4 219 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 PCDHGA7Q9Y5G6 932 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 IKBKGQ9Y6K9 419 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 PMS2P1A4D2B8 440 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 PABPN1LA6NDY0 278 aaKnown RBP16.25■□□□□ 0.19
CCDC38-203ENST00000546803 NVLO15381 856 aaKnown RBP16.25■□□□□ 0.19
CCDC38-203ENST00000546803 WISP3O95389 354 aaPredicted RBP16.25■□□□□ 0.19
CCDC38-203ENST00000546803 CAPNS1P04632 268 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 ENO2P09104 434 aaPredicted RBP16.25■□□□□ 0.19
CCDC38-203ENST00000546803 HIST1H2AGP0C0S8 130 aaPredicted RBP16.25■□□□□ 0.19
CCDC38-203ENST00000546803 UGT2B7P16662 529 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 ITIH1P19827 911 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 HIST1H2ADP20671 130 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 CRABP2P29373 138 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 SERPINB9P50453 376 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 PGGT1BP53609 377 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 RAB15P59190 212 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 HSD11B2P80365 405 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 UAP1Q16222 522 aaPredicted RBP16.25■□□□□ 0.19
CCDC38-203ENST00000546803 TBC1D25Q3MII6 688 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 TAOK1Q7L7X3 1001 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 CLEC14AQ86T13 490 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 GSPT2Q8IYD1 628 aaKnown RBP16.25■□□□□ 0.19
CCDC38-203ENST00000546803 CNPY4Q8N129 248 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 D2HGDHQ8N465 521 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 FLVCR1-AS1Q8TAF5 88 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 MDM1Q8TC05 714 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 MRRFQ96E11 262 aaKnown RBP16.25■□□□□ 0.19
CCDC38-203ENST00000546803 HIST1H2AHQ96KK5 128 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 CCDC138Q96M89 665 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 HIST1H2AJQ99878 128 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 H2AFJQ9BTM1 129 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 DDA1Q9BW61 102 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 TRIM54Q9BYV2 358 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 ASPSCR1Q9BZE9 553 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 CAB39LQ9H9S4 337 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 OCIAD1Q9NX40 245 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 SIDT1Q9NXL6 827 aaKnown RBP16.25■□□□□ 0.19
CCDC38-203ENST00000546803 SLC39A1Q9NY26 324 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 ADAMTS6Q9UKP5 1117 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 NOVA2Q9UNW9 492 aaKnown RBP16.25■□□□□ 0.19
CCDC38-203ENST00000546803 PDE10AQ9Y233 779 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 BTRCQ9Y297 605 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 PCDHGA3Q9Y5H0 932 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 PIKFYVEQ9Y2I7 2098 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 KNTC1P50748 2209 aa16.25■□□□□ 0.19
CCDC38-203ENST00000546803 COL27A1Q8IZC6 1860 aaPredicted RBP16.25■□□□□ 0.19
CCDC38-203ENST00000546803 PTPRBP23467 1997 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 A0A0J9YY10 115 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 SLC9B1P1A6NJY1 282 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 AGRPO00253 132 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 PHGDHO43175 533 aaKnown RBP16.24■□□□□ 0.19
CCDC38-203ENST00000546803 PRICKLE3O43900 615 aaPredicted RBP16.24■□□□□ 0.19
CCDC38-203ENST00000546803 SLC16A8O95907 504 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 SYF2O95926 243 aaKnown RBP16.24■□□□□ 0.19
CCDC38-203ENST00000546803 OAS2P29728 719 aaKnown RBP16.24■□□□□ 0.19
CCDC38-203ENST00000546803 PEBP1P30086 187 aaKnown RBP16.24■□□□□ 0.19
CCDC38-203ENST00000546803 ETV5P41161 510 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 MSH2P43246 934 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 MAPK10P53779 464 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 PNLIPRP1P54315 467 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 AP1S2P56377 157 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 ZNF460Q14592 562 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 TMTC4Q5T4D3 741 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 WDR93Q6P2C0 686 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 KDF1Q8NAX2 398 aaPredicted RBP16.24■□□□□ 0.19
CCDC38-203ENST00000546803 SMPDL3AQ92484 453 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 DLG3Q92796 817 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 USP7Q93009 1102 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 PPM1MQ96MI6 270 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 TEFMQ96QE5 360 aaKnown RBP16.24■□□□□ 0.19
CCDC38-203ENST00000546803 PAFAH2Q99487 392 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 ZPBPQ9BS86 351 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 DERL2Q9GZP9 239 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 ZNF180Q9UJW8 692 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 PCDHB11Q9Y5F2 797 aa16.24■□□□□ 0.19
CCDC38-203ENST00000546803 EXOC1LA0A1B0GW35 172 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 KRT87PA6NCN2 255 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 POC1B-GALNT4F8VUJ3 575 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 POLR1CO15160 346 aaPredicted RBP16.23■□□□□ 0.19
CCDC38-203ENST00000546803 TUBBP07437 444 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 CNTFP26441 200 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 SLC26A3P40879 764 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 ATP6V0D1P61421 351 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 VSNL1P62760 191 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 ACY1Q03154 408 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 IL11RAQ14626 422 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 SF1Q15637 639 aaKnown RBP16.23■□□□□ 0.19
CCDC38-203ENST00000546803 DCAF12Q5T6F0 453 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 MROH9Q5TGP6 573 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 FBXO38Q6PIJ6 1188 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 CEACAM20Q6UY09 585 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 RAPH1Q70E73 1250 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 ADAMTSL2Q86TH1 951 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 BPHLQ86WA6 291 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms