RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 GOLGA8TH3BQL2 631 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 AP3B1O00203 1094 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 KLF7O75840 302 aaPredicted RBP20.33■□□□□ 0.85
SCARB1-210ENST00000545493 CEACAM4O75871 244 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 TMEM63AO94886 807 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 CD9P21926 228 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 MAGEA6P43360 314 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 VPS41P49754 854 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 TYSND1Q2T9J0 566 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 CCSMST1Q4G0I0 132 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 ANKRD22Q5VYY1 191 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 PAPD7Q5XG87 772 aaKnown RBP20.33■□□□□ 0.85
SCARB1-210ENST00000545493 LRRC6Q86X45 466 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 OTUD6BQ8N6M0 293 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 ZNF655Q8N720 491 aaPredicted RBP20.33■□□□□ 0.85
SCARB1-210ENST00000545493 TEX19Q8NA77 164 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 OR2L8Q8NGY9 312 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 PROKR1Q8TCW9 393 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 MIB2Q96AX9 1013 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 BIRC8Q96P09 236 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 TRIM56Q9BRZ2 755 aaKnown RBP20.33■□□□□ 0.85
SCARB1-210ENST00000545493 DHRS4Q9BTZ2 278 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 SLC25A23Q9BV35 468 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 PLAAQ9Y263 795 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 SEC16AO15027 2179 aa20.33■□□□□ 0.85
SCARB1-210ENST00000545493 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.32■□□□□ 0.84
SCARB1-210ENST00000545493 CNOT3O75175 753 aaKnown RBP20.32■□□□□ 0.84
SCARB1-210ENST00000545493 NDUFS3O75489 264 aa20.32■□□□□ 0.84
SCARB1-210ENST00000545493 VAPBO95292 243 aa20.32■□□□□ 0.84
SCARB1-210ENST00000545493 S1PR4O95977 384 aa20.32■□□□□ 0.84
SCARB1-210ENST00000545493 AGXTP21549 392 aa20.32■□□□□ 0.84
SCARB1-210ENST00000545493 PGDP52209 483 aa20.32■□□□□ 0.84
SCARB1-210ENST00000545493 FOXL2P58012 376 aa20.32■□□□□ 0.84
SCARB1-210ENST00000545493 CDK16Q00536 496 aa20.32■□□□□ 0.84
SCARB1-210ENST00000545493 ATP1A4Q13733 1029 aa20.32■□□□□ 0.84
SCARB1-210ENST00000545493 KIAA0930Q6ICG6 404 aaPredicted RBP20.32■□□□□ 0.84
SCARB1-210ENST00000545493 PLCL2Q9UPR0 1127 aa20.32■□□□□ 0.84
SCARB1-210ENST00000545493 PADI2Q9Y2J8 665 aa20.32■□□□□ 0.84
SCARB1-210ENST00000545493 PCM1Q15154 2024 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 NUP210LQ5VU65 1888 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 NIPSNAP2O75323 286 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 AVILO75366 819 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 ITGAXP20702 1163 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 CCL11P51671 97 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 MLLT10P55197 1068 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 GBX1Q14549 363 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 SLC9A5Q14940 896 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 FCRL6Q6DN72 434 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 OTOAQ7RTW8 1153 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 MRGPREQ86SM8 312 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 TMEM151BQ8IW70 566 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 RASGEF1CQ8N431 466 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 DENND1AQ8TEH3 1009 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 HOMER3Q9NSC5 361 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 EURLQ9NYK6 297 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 IL1RAPL1Q9NZN1 696 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 SRPK3Q9UPE1 567 aa20.31■□□□□ 0.84
SCARB1-210ENST00000545493 PRICKLE3O43900 615 aaPredicted RBP20.3■□□□□ 0.84
SCARB1-210ENST00000545493 C1orf105O95561 183 aa20.3■□□□□ 0.84
SCARB1-210ENST00000545493 ATXN8OSP0DMR3 200 aa20.3■□□□□ 0.84
SCARB1-210ENST00000545493 PSMB5P28074 263 aa20.3■□□□□ 0.84
SCARB1-210ENST00000545493 CD97P48960 835 aa20.3■□□□□ 0.84
SCARB1-210ENST00000545493 GPS1Q13098 491 aa20.3■□□□□ 0.84
SCARB1-210ENST00000545493 MRNIPQ6NTE8 343 aa20.3■□□□□ 0.84
SCARB1-210ENST00000545493 MRPL14Q6P1L8 145 aaKnown RBP20.3■□□□□ 0.84
SCARB1-210ENST00000545493 TLDC1Q6P9B6 456 aa20.3■□□□□ 0.84
SCARB1-210ENST00000545493 CNSTQ6PJW8 725 aa20.3■□□□□ 0.84
SCARB1-210ENST00000545493 CAND1Q86VP6 1230 aaKnown RBP20.3■□□□□ 0.84
SCARB1-210ENST00000545493 RAB43Q86YS6 212 aa20.3■□□□□ 0.84
SCARB1-210ENST00000545493 FDCSPQ8NFU4 85 aa20.3■□□□□ 0.84
SCARB1-210ENST00000545493 NUDT9Q9BW91 350 aa20.3■□□□□ 0.84
SCARB1-210ENST00000545493 RAB11FIP5Q9BXF6 653 aa20.3■□□□□ 0.84
SCARB1-210ENST00000545493 IRAK4Q9NWZ3 460 aa20.3■□□□□ 0.84
SCARB1-210ENST00000545493 TSR3Q9UJK0 312 aaKnown RBP20.3■□□□□ 0.84
SCARB1-210ENST00000545493 CCDC88CQ9P219 2028 aa20.29■□□□□ 0.84
SCARB1-210ENST00000545493 KRT14P02533 472 aa20.29■□□□□ 0.84
SCARB1-210ENST00000545493 F7P08709 466 aaPredicted RBP20.29■□□□□ 0.84
SCARB1-210ENST00000545493 OGNP20774 298 aaKnown RBP20.29■□□□□ 0.84
SCARB1-210ENST00000545493 FMO4P31512 558 aa20.29■□□□□ 0.84
SCARB1-210ENST00000545493 OTX2P32243 289 aa20.29■□□□□ 0.84
SCARB1-210ENST00000545493 DCDP81605 110 aaKnown RBP20.29■□□□□ 0.84
SCARB1-210ENST00000545493 NADK2Q4G0N4 442 aa20.29■□□□□ 0.84
SCARB1-210ENST00000545493 RNF187Q5TA31 235 aaPredicted RBP20.29■□□□□ 0.84
SCARB1-210ENST00000545493 MLIPQ5VWP3 458 aa20.29■□□□□ 0.84
SCARB1-210ENST00000545493 SLC22A18Q96BI1 424 aa20.29■□□□□ 0.84
SCARB1-210ENST00000545493 FAM136AQ96C01 138 aa20.29■□□□□ 0.84
SCARB1-210ENST00000545493 MS4A14Q96JA4 679 aa20.29■□□□□ 0.84
SCARB1-210ENST00000545493 C17orf62Q9BQA9 187 aa20.29■□□□□ 0.84
SCARB1-210ENST00000545493 SLC22A11Q9NSA0 550 aa20.29■□□□□ 0.84
SCARB1-210ENST00000545493 TXLNGQ9NUQ3 528 aa20.29■□□□□ 0.84
SCARB1-210ENST00000545493 SLC39A10Q9ULF5 831 aa20.29■□□□□ 0.84
SCARB1-210ENST00000545493 PTRH2Q9Y3E5 179 aaKnown RBP20.29■□□□□ 0.84
SCARB1-210ENST00000545493 CYSRT1A8MQ03 144 aa20.28■□□□□ 0.84
SCARB1-210ENST00000545493 NRP2O60462 931 aa20.28■□□□□ 0.84
SCARB1-210ENST00000545493 MCM3P25205 808 aa20.28■□□□□ 0.84
SCARB1-210ENST00000545493 ADARP55265 1226 aaKnown RBP20.28■□□□□ 0.84
SCARB1-210ENST00000545493 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.28■□□□□ 0.84
SCARB1-210ENST00000545493 TMEM102Q8N9M5 508 aaPredicted RBP20.28■□□□□ 0.84
SCARB1-210ENST00000545493 GSDMBQ8TAX9 411 aa20.28■□□□□ 0.84
SCARB1-210ENST00000545493 SKA2Q8WVK7 121 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms