RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CYP11A1P05108 521 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 TUBG1P23258 451 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 NUDT6P53370 316 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 TEAD4Q15561 434 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 TMEM198Q66K66 360 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 ZNF280BQ86YH2 543 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 CCDC107Q8WV48 283 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 HSPBAP1Q96EW2 488 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 CNDP2Q96KP4 475 aaKnown RBP15.16■□□□□ 0.02
CHD4-210ENST00000544040 ZNF285Q96NJ3 590 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 CALML5Q9NZT1 146 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 PLEKHA6Q9Y2H5 1048 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 CEP170BQ9Y4F5 1589 aaPredicted RBP15.16■□□□□ 0.02
CHD4-210ENST00000544040 SPATA31C2B4DYI2 1134 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 INSIG1O15503 277 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 CKMT2P17540 419 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 RBM34P42696 430 aaKnown RBP15.16■□□□□ 0.02
CHD4-210ENST00000544040 SLC1A2P43004 574 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 PRKD1Q15139 912 aaPredicted RBP15.16■□□□□ 0.02
CHD4-210ENST00000544040 UGT8Q16880 541 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 DACT2Q5SW24 774 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 GPR142Q7Z601 462 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 OR5J2Q8NH18 312 aa15.16■□□□□ 0.02
CHD4-210ENST00000544040 C9IYK1 514 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 H3BSA7 217 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 HNRNPH3P31942 346 aaKnown RBP15.15■□□□□ 0.02
CHD4-210ENST00000544040 GJA9P57773 515 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 HEPACAMQ14CZ8 416 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 GRK1Q15835 563 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 LCLAT1Q6UWP7 414 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 CD300LFQ8TDQ1 290 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 FCGR1BQ92637 280 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 FTHL17Q9BXU8 183 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 CCDC86Q9H6F5 360 aaKnown RBP15.15■□□□□ 0.02
CHD4-210ENST00000544040 CILPO75339 1184 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 STATHP02808 62 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 ARL9Q6T311 187 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 KCTD9Q7L273 389 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 PAQR7Q86WK9 346 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 CEP97Q8IW35 865 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 ZNF431Q8TF32 576 aaPredicted RBP15.15■□□□□ 0.02
CHD4-210ENST00000544040 RPL10LQ96L21 214 aaKnown RBP15.15■□□□□ 0.02
CHD4-210ENST00000544040 TLR4O00206 839 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 B3GALT2O43825 422 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 UQCRC1P31930 480 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 CTSOP43234 321 aaPredicted RBP15.15■□□□□ 0.02
CHD4-210ENST00000544040 EVX2Q03828 476 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 ATAT1Q5SQI0 421 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 TPRG1LQ5T0D9 272 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 IDI2Q9BXS1 227 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 LYARQ9NX58 379 aaKnown RBP15.15■□□□□ 0.02
CHD4-210ENST00000544040 FBXO9Q9UK97 447 aaPredicted RBP15.15■□□□□ 0.02
CHD4-210ENST00000544040 OAZ3Q9UMX2 235 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 TULP2O00295 520 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 IRF6O14896 467 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 ITM2AO43736 263 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 HSDL1Q3SXM5 330 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 HMBOX1Q6NT76 420 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 CMTR2Q8IYT2 770 aaKnown RBP15.15■□□□□ 0.02
CHD4-210ENST00000544040 NXPE1Q8N323 547 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 PSMG2Q969U7 264 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 WACQ9BTA9 647 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 DCSTAMPQ9H295 470 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 PNO1Q9NRX1 252 aaKnown RBP15.15■□□□□ 0.02
CHD4-210ENST00000544040 TTC24A2A3L6 582 aaPredicted RBP15.15■□□□□ 0.02
CHD4-210ENST00000544040 CH25HO95992 272 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 VAMP1P23763 118 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 EIF1AXP47813 144 aaKnown RBP15.15■□□□□ 0.02
CHD4-210ENST00000544040 SLC18A2Q05940 514 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 UAP1L1Q3KQV9 507 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 ANKRD26P1Q6NSI1 321 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 ZNF517Q6ZMY9 492 aaPredicted RBP15.15■□□□□ 0.02
CHD4-210ENST00000544040 SPATC1Q76KD6 591 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 GALNT11Q8NCW6 608 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 STON2Q8WXE9 905 aa15.15■□□□□ 0.02
CHD4-210ENST00000544040 OR6C75A6NL08 312 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 NPHS1O60500 1241 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 ITGB5P18084 799 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 FOXM1Q08050 763 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 ZNF101Q8IZC7 436 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 CPA6Q8N4T0 437 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 STOML3Q8TAV4 291 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 ADAD1Q96M93 576 aaKnown RBP15.14■□□□□ 0.01
CHD4-210ENST00000544040 NUDT15Q9NV35 164 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 ZNF282Q9UDV7 671 aaPredicted RBP15.14■□□□□ 0.01
CHD4-210ENST00000544040 A8MUA0 341 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 RHOQP17081 205 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 POGLUT1Q8NBL1 392 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 GDAP2Q9NXN4 497 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 CNTN6Q9UQ52 1028 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 EIF1AYO14602 144 aaKnown RBP15.14■□□□□ 0.01
CHD4-210ENST00000544040 SLC22A1O15245 554 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 ITGA10O75578 1167 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 C4BPAP04003 597 aaKnown RBP15.14■□□□□ 0.01
CHD4-210ENST00000544040 PRKCGP05129 697 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 YES1P07947 543 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 PRPS2P11908 318 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 C1QTNF8P60827 252 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 GPR68Q15743 365 aa15.14■□□□□ 0.01
CHD4-210ENST00000544040 OR10Q1Q8NGQ4 319 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms