RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 PAMP19021 973 aa20.19■□□□□ 0.82
CHFR-217ENST00000540537 NR1D1P20393 614 aa20.19■□□□□ 0.82
CHFR-217ENST00000540537 OGNP20774 298 aaKnown RBP20.19■□□□□ 0.82
CHFR-217ENST00000540537 TERF1P54274 439 aa20.19■□□□□ 0.82
CHFR-217ENST00000540537 ADARP55265 1226 aaKnown RBP20.19■□□□□ 0.82
CHFR-217ENST00000540537 CYP1B1Q16678 543 aa20.19■□□□□ 0.82
CHFR-217ENST00000540537 ANKRD22Q5VYY1 191 aa20.19■□□□□ 0.82
CHFR-217ENST00000540537 CPZQ66K79 652 aa20.19■□□□□ 0.82
CHFR-217ENST00000540537 TLDC1Q6P9B6 456 aa20.19■□□□□ 0.82
CHFR-217ENST00000540537 ASB18Q6ZVZ8 466 aa20.19■□□□□ 0.82
CHFR-217ENST00000540537 PROKR1Q8TCW9 393 aa20.19■□□□□ 0.82
CHFR-217ENST00000540537 MS4A14Q96JA4 679 aa20.19■□□□□ 0.82
CHFR-217ENST00000540537 IL17FQ96PD4 163 aa20.19■□□□□ 0.82
CHFR-217ENST00000540537 CIDEBQ9UHD4 219 aa20.19■□□□□ 0.82
CHFR-217ENST00000540537 SRPK3Q9UPE1 567 aa20.19■□□□□ 0.82
CHFR-217ENST00000540537 PADI2Q9Y2J8 665 aa20.19■□□□□ 0.82
CHFR-217ENST00000540537 ARGFXA6NJG6 315 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 GOLGA8KD6RF30 607 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 GOLGA8TH3BQL2 631 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 TMEM63AO94886 807 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 FKBP9O95302 570 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 C1orf105O95561 183 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 ESR1P03372 595 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 MLNP12872 115 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 MAGP20916 626 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 ATP5DP30049 168 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 COILP38432 576 aaPredicted RBP20.18■□□□□ 0.82
CHFR-217ENST00000540537 CCNFP41002 786 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 PTGIRP43119 386 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 CASC4Q6P4E1 433 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 CAND1Q86VP6 1230 aaKnown RBP20.18■□□□□ 0.82
CHFR-217ENST00000540537 MCUQ8NE86 351 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 SKA2Q8WVK7 121 aaPredicted RBP20.18■□□□□ 0.82
CHFR-217ENST00000540537 RAD51AP1Q96B01 352 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 FOPNLQ96NB1 174 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 GBP5Q96PP8 586 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 ING2Q9H160 280 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 XAB2Q9HCS7 855 aaKnown RBP20.18■□□□□ 0.82
CHFR-217ENST00000540537 ACSS2Q9NR19 701 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 INTS7Q9NVH2 962 aaKnown RBP20.18■□□□□ 0.82
CHFR-217ENST00000540537 SAMD15Q9P1V8 674 aa20.18■□□□□ 0.82
CHFR-217ENST00000540537 PCDHGA9Q9Y5G4 932 aaKnown RBP20.18■□□□□ 0.82
CHFR-217ENST00000540537 PGRMC1O00264 195 aaKnown RBP20.17■□□□□ 0.82
CHFR-217ENST00000540537 CTSBP07858 339 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 CBSLP0DN79 551 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 FMO4P31512 558 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 CBSP35520 551 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 GBX1Q14549 363 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 FAM69BQ5VUD6 431 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 CCDC137Q6PK04 289 aaKnown RBP20.17■□□□□ 0.82
CHFR-217ENST00000540537 TAX1BP1Q86VP1 789 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 FAM20CQ8IXL6 584 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 RAB42Q8N4Z0 105 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 C2orf73Q8N5S3 287 aaPredicted RBP20.17■□□□□ 0.82
CHFR-217ENST00000540537 ZNF655Q8N720 491 aaPredicted RBP20.17■□□□□ 0.82
CHFR-217ENST00000540537 TEX19Q8NA77 164 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 TXLNGQ9NUQ3 528 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 IRAK4Q9NWZ3 460 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 EURLQ9NYK6 297 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 VPS9D1Q9Y2B5 631 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 NEU2Q9Y3R4 380 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 NFS1Q9Y697 457 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 ANKRD12Q6UB98 2062 aa20.17■□□□□ 0.82
CHFR-217ENST00000540537 CCDC88CQ9P219 2028 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 FAM237BA0A1B0GVD1 139 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 MAGEB16A2A368 324 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 PRICKLE3O43900 615 aaPredicted RBP20.16■□□□□ 0.82
CHFR-217ENST00000540537 NIPSNAP2O75323 286 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 CD63P08962 238 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 BDKRB1P46663 353 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 DCDP81605 110 aaKnown RBP20.16■□□□□ 0.82
CHFR-217ENST00000540537 CHAF1BQ13112 559 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 C1orf189Q5VU69 101 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 NEPROQ6NW34 567 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 RAB43Q86YS6 212 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 CILP2Q8IUL8 1156 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 ZBTB2Q8N680 514 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 LMNTD1Q8N9Z9 388 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 HMGCLL1Q8TB92 370 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 MAGEC3Q8TD91 643 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 DLG3Q92796 817 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 SLC25A23Q9BV35 468 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 MLXIPLQ9NP71 852 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.16■□□□□ 0.82
CHFR-217ENST00000540537 KLHL20Q9Y2M5 609 aa20.16■□□□□ 0.82
CHFR-217ENST00000540537 TNRC6AQ8NDV7 1962 aaKnown RBP20.15■□□□□ 0.82
CHFR-217ENST00000540537 SDR42E2A6NKP2 422 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 KLF7O75840 302 aaPredicted RBP20.15■□□□□ 0.82
CHFR-217ENST00000540537 PDGFAP04085 211 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 GCGRP47871 477 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 CCL11P51671 97 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 FOXK1P85037 733 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 DHX34Q14147 1143 aaKnown RBP20.15■□□□□ 0.82
CHFR-217ENST00000540537 SF1Q15637 639 aaKnown RBP20.15■□□□□ 0.82
CHFR-217ENST00000540537 ANKRD20A4Q4UJ75 823 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 ZC3H12BQ5HYM0 836 aaKnown RBP20.15■□□□□ 0.82
CHFR-217ENST00000540537 PAPD7Q5XG87 772 aaKnown RBP20.15■□□□□ 0.82
CHFR-217ENST00000540537 FCRL6Q6DN72 434 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 FIGLAQ6QHK4 219 aa20.15■□□□□ 0.82
CHFR-217ENST00000540537 CENPUQ71F23 418 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms