RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 AGAP2Q99490 1192 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 TTLL2Q9BWV7 592 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 C1QTNF1Q9BXJ1 281 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 OSBPL2Q9H1P3 480 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 RNF167Q9H6Y7 350 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 TNFRSF12AQ9NP84 129 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 BRD7Q9NPI1 651 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 MUTYHQ9UIF7 546 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 FBXO10Q9UK96 956 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 PADI3Q9ULW8 664 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 COPS3Q9UNS2 423 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 CNTN6Q9UQ52 1028 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 RNF6Q9Y252 685 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 INVSQ9Y283 1065 aa9.28□□□□□ -0.92
CTNNA1-243ENST00000540387 ANKRD12Q6UB98 2062 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 HACD1B0YJ81 288 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 RGS10O43665 173 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 SULT1B1O43704 296 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 NPHS1O60500 1241 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 JUNDP17535 347 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 HRH2P25021 359 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 PIK3CBP42338 1070 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 NR2C2P49116 596 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 GLUD2P49448 558 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 GBX2P52951 348 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 BCAR1P56945 870 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 TLE2Q04725 743 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 HYAL2Q12891 473 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 RAPSNQ13702 412 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 GRM3Q14832 879 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 SLC10A6Q3KNW5 377 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 TRIM60Q495X7 471 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 FAM26DQ5JW98 314 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 UBXN11Q5T124 520 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 TDRD10Q5VZ19 366 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 FAM219BQ5XKK7 198 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 RETSATQ6NUM9 610 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 TEX261Q6UWH6 196 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 ADGRG3Q86Y34 549 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 RDH10Q8IZV5 341 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 VWA5B2Q8N398 1253 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 FSTL5Q8N475 847 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 OR5B17Q8NGF7 314 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 UFD1Q92890 307 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 PDLIM5Q96HC4 596 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 TMEM106CQ9BVX2 250 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 ITPAQ9BY32 194 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 CXCL16Q9H2A7 254 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 RPF1Q9H9Y2 349 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 RNF19AQ9NV58 838 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 DPP7Q9UHL4 492 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 U3KQ87 197 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 MICAL3Q7RTP6 2002 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 TRAV6A0A075B6T7 132 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 LACTBL1A8MY62 500 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 TARM1B6A8C7 271 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 GPR182O15218 404 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 HUS1O60921 280 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 ATP6AP2O75787 350 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 AHSGP02765 367 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 MLNP12872 115 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 F8A1P23610 371 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 AKAP5P24588 427 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 CTSKP43235 329 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 BRCC3P46736 316 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 CLDN10P78369 228 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 IKZF1Q13422 519 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 BAK1Q16611 211 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 ZACNQ401N2 412 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 SOWAHCQ53LP3 525 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 ALFQ53S48 1182 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 ARMCX4Q5H9R4 360 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 TSTD2Q5T7W7 516 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 SULT1C3Q6IMI6 304 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 ZNF782Q6ZMW2 699 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 TMPRSS9Q7Z410 1059 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 RASGRP3Q8IV61 690 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 TMEM130Q8N3G9 435 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 C9orf62Q8N4C0 152 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 KBTBD8Q8NFY9 601 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 DNAJB14Q8TBM8 379 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 SIPA1Q96FS4 1042 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 Q96MT0 163 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 FCRL3Q96P31 734 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 OMDQ99983 421 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 ZNF416Q9BWM5 594 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 PITHD1Q9GZP4 211 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 SLC22A4Q9H015 551 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 NXF3Q9H4D5 531 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 RNF121Q9H920 327 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 SCN3BQ9NY72 215 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 TRHDEQ9UKU6 1024 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 RUVBL2Q9Y230 463 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 PCDHB14Q9Y5E9 798 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 STON1Q9Y6Q2 735 aa9.27□□□□□ -0.93
CTNNA1-243ENST00000540387 SIP14410 1827 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 A0A1W2PQ09 198 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 F8W810 466 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 AGRPO00253 132 aa9.26□□□□□ -0.93
CTNNA1-243ENST00000540387 BCKDKO14874 412 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms