RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 SIGIRRQ6IA17 410 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 DTX1Q86Y01 620 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 CLVS1Q8IUQ0 354 aaPredicted RBP7.39□□□□□ -1.23
GNE-205ENST00000539815 APLFQ8IW19 511 aaPredicted RBP7.39□□□□□ -1.23
GNE-205ENST00000539815 OR6P1Q8NGX9 317 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 GIMAP5Q96F15 307 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 SCYL1Q96KG9 808 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 CSPG4P5Q96PW8 444 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 COPS8Q99627 209 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 FAM129AQ9BZQ8 928 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 VIPAS39Q9H9C1 493 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 C12orf4Q9NQ89 552 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 ERRFI1Q9UJM3 462 aaPredicted RBP7.39□□□□□ -1.23
GNE-205ENST00000539815 KMT2BQ9UMN6 2715 aaPredicted RBP7.39□□□□□ -1.23
GNE-205ENST00000539815 RGSL1A5PLK6 1076 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 SLC9B1P1A6NJY1 282 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 C3orf70A6NLC5 250 aaPredicted RBP7.39□□□□□ -1.23
GNE-205ENST00000539815 KRT86O43790 486 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 CRTAMO95727 393 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 SPAM1P38567 509 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 TUBB4BP68371 445 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 DSC2Q02487 901 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 TUBB2AQ13885 445 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 GALNT3Q14435 633 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 ZC3H12BQ5HYM0 836 aaKnown RBP7.39□□□□□ -1.23
GNE-205ENST00000539815 ADAMTSL4Q6UY14 1074 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 ZNF765Q7L2R6 523 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 CDC26Q8NHZ8 85 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 EPS8L1Q8TE68 723 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 CCM2Q9BSQ5 444 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 TUBB2BQ9BVA1 445 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 MAGEB5Q9BZ81 275 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 C19orf25Q9UFG5 118 aaPredicted RBP7.39□□□□□ -1.23
GNE-205ENST00000539815 TBC1D29Q9UFV1 150 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 PPT2Q9UMR5 302 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 ZGRF1Q86YA3 2104 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 CYP1A1P04798 512 aaPredicted RBP7.39□□□□□ -1.23
GNE-205ENST00000539815 STX1AQ16623 288 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 CLEC16AQ2KHT3 1053 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.39□□□□□ -1.23
GNE-205ENST00000539815 SLC6A19Q695T7 634 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 FAM151BQ6UXP7 276 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 BHLHA9Q7RTU4 235 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 TSPAN33Q86UF1 283 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 CCDC63Q8NA47 563 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 PSD4Q8NDX1 1056 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 ZNF398Q8TD17 642 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 RSC1A1Q92681 617 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 RERGQ96A58 199 aaPredicted RBP7.39□□□□□ -1.23
GNE-205ENST00000539815 SLC22A18Q96BI1 424 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 ARL8AQ96BM9 186 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 ALKBH8Q96BT7 664 aaKnown RBP7.39□□□□□ -1.23
GNE-205ENST00000539815 TRABDQ9H4I3 376 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 PFDN2Q9UHV9 154 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 TRIM33Q9UPN9 1127 aa7.39□□□□□ -1.23
GNE-205ENST00000539815 TMEM184BQ9Y519 407 aaPredicted RBP7.39□□□□□ -1.23
GNE-205ENST00000539815 PCDHGA9Q9Y5G4 932 aaKnown RBP7.39□□□□□ -1.23
GNE-205ENST00000539815 IGLV3-10A0A075B6K4 115 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 NSG1A0A0A6YYJ2 146 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 A0A0J9YYE9 177 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 CXorf51AA0A1B0GTR3 108 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 PSMD12O00232 456 aaPredicted RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 FBP2O00757 339 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 TSPAN9O75954 239 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 INMTO95050 263 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 TRBC1P01850 177 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 TPH1P17752 444 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 CD53P19397 219 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 PRKCIP41743 596 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 NSG1P42857 185 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 ARFIP2P53365 341 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 PRAMEP78395 509 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 SRSF1Q07955 248 aaKnown RBP eCLIP7.38□□□□□ -1.23
GNE-205ENST00000539815 TMEM115Q12893 351 aaPredicted RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 AIMP2Q13155 320 aaKnown RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 DEPDC1Q5TB30 811 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 TTLL10Q6ZVT0 673 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 KRT77Q7Z794 578 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 PAQR7Q86WK9 346 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 PSTKQ8IV42 348 aaKnown RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 STON2Q8WXE9 905 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 PMEPA1Q969W9 287 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 HSPBAP1Q96EW2 488 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 TIMM29Q9BSF4 260 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 XAB2Q9HCS7 855 aaKnown RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 P4HTMQ9NXG6 502 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 TMEM9Q9P0T7 183 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 SAMD15Q9P1V8 674 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 LHX3Q9UBR4 397 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 IGSF10Q6WRI0 2623 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 MUC3AQ02505 3323 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 SONP18583 2426 aaKnown RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 GLYATL1P3A0A0U1RQE8 302 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 TTC24A2A3L6 582 aaPredicted RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 GOLGA8MH3BSY2 632 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 CDC40O60508 579 aaKnown RBP eCLIP7.38□□□□□ -1.23
GNE-205ENST00000539815 IGLV3-25P01717 112 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 H2AFZP0C0S5 128 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 EBLN1P0CF75 366 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 ITGB6P18564 788 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms