RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 HMBSP08397 361 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 SPNP16150 400 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 ZNF30P17039 623 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 KCNA5P22460 613 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 PTPN3P26045 913 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 PSMB9P28065 219 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 CD6P30203 668 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 ICAM3P32942 547 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 HTR7P34969 479 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 CAP2P40123 477 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 DCTP40126 519 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 HTR2BP41595 481 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 NRIP1P48552 1158 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 SERPINH1P50454 418 aaKnown RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 ETV1P50549 477 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 SCNN1GP51170 649 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 POLR2JP52435 117 aaKnown RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 NKX2-5P52952 324 aaPredicted RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 TAS2R39P59534 338 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 NCS1P62166 190 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 ERVK-8P63133 956 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 S100A12P80511 92 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 TFAMQ00059 246 aaKnown RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 POU5F1BQ06416 359 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 SCAPQ12770 1279 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 PWP1Q13610 501 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 SEMA3AQ14563 771 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 TARBP2Q15633 366 aaKnown RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 CDO1Q16878 200 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 MSMPQ1L6U9 139 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 SLC25A52Q3SY17 297 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 ZIK1Q3SY52 487 aaPredicted RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 TBRG1Q3YBR2 411 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 VPS26BQ4G0F5 336 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 COLEC12Q5KU26 742 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 ARMC4Q5T2S8 1044 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 LCE3BQ5TA77 95 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 STRIP1Q5VSL9 837 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 FKBP1CQ5VVH2 108 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 TMEM236Q5W0B7 351 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 JADE1Q6IE81 842 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 STYK1Q6J9G0 422 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 TIGD7Q6NT04 549 aaPredicted RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 CES5AQ6NT32 575 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 C19orf48Q6RUI8 117 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 CYHR1Q6ZMK1 362 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 RNF165Q6ZSG1 346 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 LRRC8DQ7L1W4 858 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 OTOP3Q7RTS5 596 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 BNIPLQ7Z465 357 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 B3GNT8Q7Z7M8 397 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 GLRX5Q86SX6 157 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 NPAS4Q8IUM7 802 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 SLC41A1Q8IVJ1 513 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 TCAIMQ8N3R3 496 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 STX19Q8N4C7 294 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 CERS5Q8N5B7 392 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 GDPD1Q8N9F7 314 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 FAM181AQ8N9Y4 354 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 DNERQ8NFT8 737 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 OR5H6Q8NGV6 325 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 IL31RAQ8NI17 732 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 SLC35F5Q8WV83 523 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 KLHL6Q8WZ60 621 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 ZC3HAV1LQ96H79 300 aaKnown RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 ZFYVE19Q96K21 471 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 ZBTB45Q96K62 511 aaPredicted RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 C8orf48Q96LL4 319 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 HYLS1Q96M11 299 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 TEKT5Q96M29 485 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 OR2A14Q96R47 310 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 GAD1Q99259 594 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 SEPHS2Q99611 448 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 C17orf62Q9BQA9 187 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 TTLL2Q9BWV7 592 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 REXO4Q9GZR2 422 aaKnown RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 RPF1Q9H9Y2 349 aaKnown RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 PRDM8Q9NQV8 689 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 ENTPD7Q9NQZ7 604 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 POLE4Q9NR33 117 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 OLA1Q9NTK5 396 aaKnown RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 POLR3BQ9NW08 1133 aaPredicted RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 ING3Q9NXR8 418 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 COL20A1Q9P218 1284 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 ERVK-18Q9QC07 812 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 TJP2Q9UDY2 1190 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 POLG2Q9UHN1 485 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 ATPIF1Q9UII2 106 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 NDRG4Q9ULP0 352 aaKnown RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 DOCK4Q8N1I0 1966 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 LCTP09848 1927 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 IGKV6D-21A0A0A0MT36 114 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 A0A1B0GVM2 712 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 TMEM150BA6NC51 233 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 CCDC182A6NF36 153 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 A8MVJ9 347 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 hCG_2039718K7EN88 272 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 CTDSP2O14595 271 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 STX16O14662 325 aa6.54□□□□□ -1.36
USP28-207ENST00000538475 SLC9A3R1O14745 358 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms