RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 CXCR5P32302 372 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 GRIA3P42263 894 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 CD97P48960 835 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 ATP1A4Q13733 1029 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 TMED2Q15363 201 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 SF1Q15637 639 aaKnown RBP8.57□□□□□ -1.04
COPB1-211ENST00000534234 KCTD19Q17RG1 926 aaPredicted RBP8.57□□□□□ -1.04
COPB1-211ENST00000534234 NADK2Q4G0N4 442 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 CES3Q6UWW8 571 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 ZNF662Q6ZS27 426 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 OTOAQ7RTW8 1153 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 SDCCAG8Q86SQ7 713 aaPredicted RBP8.57□□□□□ -1.04
COPB1-211ENST00000534234 TAX1BP1Q86VP1 789 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 LRRC6Q86X45 466 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 MCATQ8IVS2 390 aaKnown RBP8.57□□□□□ -1.04
COPB1-211ENST00000534234 DCUN1D3Q8IWE4 304 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 MPP5Q8N3R9 675 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 FDCSPQ8NFU4 85 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 TRIM58Q8NG06 486 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 OR2L8Q8NGY9 312 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 PROKR1Q8TCW9 393 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 SKA2Q8WVK7 121 aaPredicted RBP8.57□□□□□ -1.04
COPB1-211ENST00000534234 RAD51AP1Q96B01 352 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 MFSD3Q96ES6 412 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 IP6K3Q96PC2 410 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 IL17FQ96PD4 163 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 NDC1Q9BTX1 674 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 KIFC1Q9BW19 673 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 NUDT9Q9BW91 350 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 HOMER3Q9NSC5 361 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 TTC7AQ9ULT0 858 aaPredicted RBP8.57□□□□□ -1.04
COPB1-211ENST00000534234 PTRH2Q9Y3E5 179 aaKnown RBP8.57□□□□□ -1.04
COPB1-211ENST00000534234 ZNF451Q9Y4E5 1061 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 GOLGA8KD6RF30 607 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 GOLGA8TH3BQL2 631 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 RASGRF2O14827 1237 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 DPM1O60762 260 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 VPS4BO75351 444 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 RPS3P23396 243 aaKnown RBP eCLIP8.56□□□□□ -1.042e-7■■■■■ 29.5
COPB1-211ENST00000534234 MGAT1P26572 445 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 FOLR3P41439 243 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 TERF1P54274 439 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 ARSFP54793 590 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 EIF3BP55884 814 aaKnown RBP8.56□□□□□ -1.04
COPB1-211ENST00000534234 CDK16Q00536 496 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 SLC9A5Q14940 896 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 TRIP13Q15645 432 aaPredicted RBP8.56□□□□□ -1.04
COPB1-211ENST00000534234 NKAIN1Q4KMZ8 207 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 MRNIPQ6NTE8 343 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 MRPL14Q6P1L8 145 aaKnown RBP8.56□□□□□ -1.04
COPB1-211ENST00000534234 LRRC8BQ6P9F7 803 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 FIGLAQ6QHK4 219 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 TTLL10Q6ZVT0 673 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 LRRC8AQ8IWT6 810 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 OTUD6BQ8N6M0 293 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 EFCAB3Q8N7B9 438 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 OR2Y1Q8NGV0 311 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 CPT1CQ8TCG5 803 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 PTERQ96BW5 349 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 INTS7Q9NVH2 962 aaKnown RBP8.56□□□□□ -1.04
COPB1-211ENST00000534234 SYBUQ9NX95 663 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 GPR83Q9NYM4 423 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 ANKMY1Q9P2S6 941 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 NDOR1Q9UHB4 597 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 GNPTGQ9UJJ9 305 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 VPS4AQ9UN37 437 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 MRFAP1Q9Y605 127 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 NFS1Q9Y697 457 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 HECTD1Q9ULT8 2610 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 ZNF106Q9H2Y7 1883 aaKnown RBP8.56□□□□□ -1.04
COPB1-211ENST00000534234 TCRBV7S3A2A0A539 114 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 CLEC18AA5D8T8 446 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 PEX12O00623 359 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 PFDN6O15212 129 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 PRICKLE3O43900 615 aaPredicted RBP8.56□□□□□ -1.04
COPB1-211ENST00000534234 CNOT3O75175 753 aaKnown RBP8.56□□□□□ -1.04
COPB1-211ENST00000534234 AVILO75366 819 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 C1orf105O95561 183 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 PYGBP11216 843 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 TPSB2P20231 275 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 CHRM3P20309 590 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 ARNTP27540 789 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 FMO4P31512 558 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 FOXL2P58012 376 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 SARNPP82979 210 aaKnown RBP8.56□□□□□ -1.04
COPB1-211ENST00000534234 SRSF1Q07955 248 aaKnown RBP eCLIP8.56□□□□□ -1.043e-14■■■□□ 17.4
COPB1-211ENST00000534234 RAPSNQ13702 412 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 TPSAB1Q15661 275 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 CCSMST1Q4G0I0 132 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 ZC3H12BQ5HYM0 836 aaKnown RBP8.56□□□□□ -1.04
COPB1-211ENST00000534234 DCAF10Q5QP82 559 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 FCRL6Q6DN72 434 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 JMJD6Q6NYC1 403 aaPredicted RBP8.56□□□□□ -1.04
COPB1-211ENST00000534234 CLEC18BQ6UXF7 455 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 MRGPREQ86SM8 312 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 HPS6Q86YV9 775 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 RAB42Q8N4Z0 105 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 FAM26EQ8N5C1 309 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 PRELID2Q8N945 189 aa8.56□□□□□ -1.04
COPB1-211ENST00000534234 CLEC18CQ8NCF0 446 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms