RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 MARCH7Q9H992 704 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 OPTCQ9UBM4 332 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 RIMKLBQ9ULI2 386 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 DHRS7Q9Y394 339 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 PCDHB14Q9Y5E9 798 aa18.9■□□□□ 0.62
CAPN1-226ENST00000533820 BNIP3LO60238 219 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 NBNO60934 754 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 TMCC2O75069 709 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 CREG1O75629 220 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 NR4A2P43354 598 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 ZNF157P51786 506 aaPredicted RBP18.89■□□□□ 0.62
CAPN1-226ENST00000533820 GP2P55259 537 aaKnown RBP18.89■□□□□ 0.62
CAPN1-226ENST00000533820 ARF5P84085 180 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 KIAA0040Q15053 153 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 RBM48Q5RL73 367 aaKnown RBP18.89■□□□□ 0.62
CAPN1-226ENST00000533820 CES5AQ6NT32 575 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 SLC16A12Q6ZSM3 486 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 ADAMTSL2Q86TH1 951 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 TMEM173Q86WV6 379 aaPredicted RBP18.89■□□□□ 0.62
CAPN1-226ENST00000533820 EID3Q8N140 333 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 CDC26Q8NHZ8 85 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 PPP3R2Q96LZ3 170 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 ERVK-18Q9QC07 812 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 DNMT3LQ9UJW3 386 aa18.89■□□□□ 0.62
CAPN1-226ENST00000533820 TTC34A8MYJ7 566 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 ATF6P18850 670 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 PHC1P78364 1004 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 MAPK11Q15759 364 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 SMN1Q16637 294 aaKnown RBP18.89■□□□□ 0.61
CAPN1-226ENST00000533820 SLCO6A1Q86UG4 719 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 SPERTQ8NA61 448 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 OR8J3Q8NGG0 315 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 RHBDF1Q96CC6 855 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 FEM1AQ9BSK4 669 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 ATP11BQ9Y2G3 1177 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 ZSCAN5BA6NJL1 495 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 RGS14O43566 566 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 JUNBP17275 347 aaPredicted RBP18.89■□□□□ 0.61
CAPN1-226ENST00000533820 CDH4P55283 916 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 VBP1P61758 197 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 RING1Q06587 406 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 MBTPS1Q14703 1052 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 CCDC58Q4VC31 144 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 TMEM236Q5W0B7 351 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 ALG1LQ6GMV1 187 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 PRR23CQ6ZRP0 262 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 NEK10Q6ZWH5 1172 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 SLC24A5Q71RS6 500 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 LILRB4Q8NHJ6 448 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 NDNFQ8TB73 568 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 GLMNQ92990 594 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 RBM4BQ9BQ04 359 aaKnown RBP18.89■□□□□ 0.61
CAPN1-226ENST00000533820 RBM4Q9BWF3 364 aaKnown RBP18.89■□□□□ 0.61
CAPN1-226ENST00000533820 LRTM1Q9HBL6 345 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 PNMA8BQ9ULN7 279 aaPredicted RBP18.89■□□□□ 0.61
CAPN1-226ENST00000533820 ERGIC3Q9Y282 383 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 DLGAP4Q9Y2H0 992 aa18.89■□□□□ 0.61
CAPN1-226ENST00000533820 SLC38A8A6NNN8 435 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 hCG_2039718K7EN88 272 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 TGFBR1P36897 503 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 GNPDA1P46926 289 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 ISL1P61371 349 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 RHOAP61586 193 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 MICU2Q8IYU8 434 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 DEPDC4Q8N2C3 294 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 RNF175Q8N4F7 328 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 MCOLN3Q8TDD5 553 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 TRUB1Q8WWH5 349 aaKnown RBP18.88■□□□□ 0.61
CAPN1-226ENST00000533820 UBE2FQ969M7 185 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 FKBP10Q96AY3 582 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 TBC1D14Q9P2M4 693 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 CCL27Q9Y4X3 112 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 TNPO3Q9Y5L0 923 aaKnown RBP18.88■□□□□ 0.61
CAPN1-226ENST00000533820 GBF1Q92538 1859 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 BCKDKO14874 412 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 AREL1O15033 823 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 F11P03951 625 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 TACR1P25103 407 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 CCND3P30281 292 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-226ENST00000533820 MAGEA11P43364 429 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 IFITM2Q01629 132 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 EMX1Q04741 257 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-226ENST00000533820 PCBP2Q15366 365 aaKnown RBP eCLIP18.88■□□□□ 0.612e-6■■■□□ 14.7
CAPN1-226ENST00000533820 CACHD1Q5VU97 1274 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 ADGRG2Q8IZP9 1017 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 ZFP90Q8TF47 636 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 PYCR2Q96C36 320 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 EGLN2Q96KS0 407 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 RASSF1Q9NS23 344 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 IL37Q9NZH6 218 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 IL17CQ9P0M4 197 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 FAM8A1Q9UBU6 413 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 VWA8A3KMH1 1905 aa18.88■□□□□ 0.61
CAPN1-226ENST00000533820 NDUFS2O75306 463 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 SH3BGRLO75368 114 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 CYBAP13498 195 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 PSMB9P28065 219 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 CDKN2CP42773 168 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 OCA2Q04671 838 aa18.87■□□□□ 0.61
CAPN1-226ENST00000533820 DNASE1L3Q13609 305 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms