RNA–Protein interactions for RNA: ENST00000533194.5

CCT3-216, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-216ENST00000533194 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.93□□□□□ -1.3
CCT3-216ENST00000533194 SOX17Q9H6I2 414 aaPredicted RBP6.93□□□□□ -1.3
CCT3-216ENST00000533194 LUC7LQ9NQ29 371 aaKnown RBP6.93□□□□□ -1.3
CCT3-216ENST00000533194 CUTCQ9NTM9 273 aa6.93□□□□□ -1.3
CCT3-216ENST00000533194 SPTLC3Q9NUV7 552 aa6.93□□□□□ -1.3
CCT3-216ENST00000533194 SPHK1Q9NYA1 384 aa6.93□□□□□ -1.3
CCT3-216ENST00000533194 ITGB1BP2Q9UKP3 347 aa6.93□□□□□ -1.3
CCT3-216ENST00000533194 SLC39A10Q9ULF5 831 aa6.93□□□□□ -1.3
CCT3-216ENST00000533194 NENFQ9UMX5 172 aa6.93□□□□□ -1.3
CCT3-216ENST00000533194 CSAG2Q9Y5P2 127 aa6.93□□□□□ -1.3
CCT3-216ENST00000533194 MRFAP1Q9Y605 127 aa6.93□□□□□ -1.3
CCT3-216ENST00000533194 HS3ST3B1Q9Y662 390 aa6.93□□□□□ -1.3
CCT3-216ENST00000533194 UNC79Q9P2D8 2635 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 IGLV3-16A0A075B6K0 115 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 hCG_1818297A0A087WSY0 165 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 AGAP14A8MT82 685 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 APOC4-APOC2K7ER74 178 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 MASP2O00187 686 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 CCL21O00585 134 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 CCL22O00626 93 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 SOCS6O14544 535 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 ALOX12BO75342 701 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 WFS1O76024 890 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 HPP00738 406 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 APOC2P02655 101 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 ESRRAP11474 423 aaPredicted RBP6.92□□□□□ -1.3
CCT3-216ENST00000533194 PSMB4P28070 264 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 HTR1EP28566 365 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 GRNP28799 593 aaKnown RBP6.92□□□□□ -1.3
CCT3-216ENST00000533194 SMSP52788 366 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 KCNK10P57789 538 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 EIF3EP60228 445 aaKnown RBP6.92□□□□□ -1.3
CCT3-216ENST00000533194 NAA25Q14CX7 972 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 SF1Q15637 639 aaKnown RBP6.92□□□□□ -1.3
CCT3-216ENST00000533194 NKG7Q16617 165 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 TAZQ16635 292 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 DNAJC21Q5F1R6 531 aaKnown RBP6.92□□□□□ -1.3
CCT3-216ENST00000533194 ANKRD20A2Q5SQ80 823 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 ANKRD20A1Q5TYW2 823 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 ANKRD20A3Q5VUR7 823 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 PRMT9Q6P2P2 845 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 KIRREL2Q6UWL6 708 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 BNC2Q6ZN30 1099 aaPredicted RBP6.92□□□□□ -1.3
CCT3-216ENST00000533194 ARHGEF18Q6ZSZ5 1173 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 BBS12Q6ZW61 710 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 MRGPRGQ86SM5 289 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 DNAJC22Q8N4W6 341 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 ZNF808Q8N4W9 903 aaPredicted RBP6.92□□□□□ -1.3
CCT3-216ENST00000533194 METTL27Q8N6F8 245 aaPredicted RBP6.92□□□□□ -1.3
CCT3-216ENST00000533194 STYXQ8WUJ0 223 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 NR4A3Q92570 626 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 RELTQ969Z4 430 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 MIEF2Q96C03 454 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 MAGED4Q96JG8 741 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 SLX1AQ9BQ83 275 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 YIPF2Q9BWQ6 316 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 SLC26A1Q9H2B4 701 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 NHEJ1Q9H9Q4 299 aaPredicted RBP6.92□□□□□ -1.3
CCT3-216ENST00000533194 ZNF160Q9HCG1 818 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 ZNF304Q9HCX3 659 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 NLE1Q9NVX2 485 aaPredicted RBP6.92□□□□□ -1.3
CCT3-216ENST00000533194 PTGFRNQ9P2B2 879 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 IMPACTQ9P2X3 320 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 ZNF282Q9UDV7 671 aaPredicted RBP6.92□□□□□ -1.3
CCT3-216ENST00000533194 SEC14L3Q9UDX4 400 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 TEKT2Q9UIF3 430 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 INTUQ9ULD6 942 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 PLAGL1Q9UM63 463 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 CDC14AQ9UNH5 594 aa6.92□□□□□ -1.3
CCT3-216ENST00000533194 MRPS2Q9Y399 296 aaKnown RBP6.92□□□□□ -1.3
CCT3-216ENST00000533194 SPENQ96T58 3664 aaKnown RBP6.92□□□□□ -1.3
CCT3-216ENST00000533194 NOTCH2Q04721 2471 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 TRBV5-4A0A0C4DH59 114 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 GOLGA6L9A6NEM1 432 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 H3BMH7 237 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 H7C0S8 307 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 PCDH17O14917 1159 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 PSMD3O43242 534 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 SRPX2O60687 465 aaPredicted RBP6.91□□□□□ -1.3
CCT3-216ENST00000533194 CNOT3O75175 753 aaKnown RBP6.91□□□□□ -1.3
CCT3-216ENST00000533194 TJP3O95049 919 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 UNC5CO95185 931 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 RASAL1O95294 804 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 FKBP9O95302 570 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 EIF2S1P05198 315 aaKnown RBP6.91□□□□□ -1.3
CCT3-216ENST00000533194 APOA4P06727 396 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 SNRPB2P08579 225 aaKnown RBP6.91□□□□□ -1.3
CCT3-216ENST00000533194 RBP3P10745 1247 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 CD9P21926 228 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 FBLP22087 321 aaKnown RBP6.91□□□□□ -1.3
CCT3-216ENST00000533194 MSNP26038 577 aaKnown RBP6.91□□□□□ -1.3
CCT3-216ENST00000533194 PKLRP30613 574 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 SSTR2P30874 369 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 ADRA1AP35348 466 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 GABRA4P48169 554 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 CSE1LP55060 971 aaKnown RBP6.91□□□□□ -1.3
CCT3-216ENST00000533194 FOXL2P58012 376 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 COPS2P61201 443 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 HSPA14Q0VDF9 509 aa6.91□□□□□ -1.3
CCT3-216ENST00000533194 POU6F1Q14863 301 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms