RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 SPATA4Q8NEY3 305 aa22.17■■□□□ 1.14
CAPN1-222ENST00000532285 OR1L3Q8NH93 324 aa22.17■■□□□ 1.14
CAPN1-222ENST00000532285 N4BP2L2Q92802 583 aaPredicted RBP22.17■■□□□ 1.14
CAPN1-222ENST00000532285 EXTL1Q92935 676 aa22.17■■□□□ 1.14
CAPN1-222ENST00000532285 CATSPER2Q96P56 530 aa22.17■■□□□ 1.14
CAPN1-222ENST00000532285 IL17FQ96PD4 163 aa22.17■■□□□ 1.14
CAPN1-222ENST00000532285 TSR3Q9UJK0 312 aaKnown RBP22.17■■□□□ 1.14
CAPN1-222ENST00000532285 TERTO14746 1132 aaKnown RBP22.16■■□□□ 1.14
CAPN1-222ENST00000532285 TCN2P20062 427 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 CYP2A7P20853 494 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 F8A1P23610 371 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 ITGA1P56199 1179 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 MPP1Q00013 466 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 ZIC1Q15915 447 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 TBR1Q16650 682 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 CRTC2Q53ET0 693 aaPredicted RBP22.16■■□□□ 1.14
CAPN1-222ENST00000532285 MAATS1Q7Z4T9 603 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 C2orf73Q8N5S3 287 aaPredicted RBP22.16■■□□□ 1.14
CAPN1-222ENST00000532285 STARD8Q92502 1023 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 PWWP2AQ96N64 755 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 LRFN5Q96NI6 719 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 ARHGAP9Q9BRR9 750 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 FAM60AQ9NP50 221 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 ZC3H7BQ9UGR2 993 aaKnown RBP22.16■■□□□ 1.14
CAPN1-222ENST00000532285 MED16Q9Y2X0 877 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 DHRS7Q9Y394 339 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 TEX264Q9Y6I9 313 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 PIEZO2Q9H5I5 2752 aa22.16■■□□□ 1.14
CAPN1-222ENST00000532285 FAM187AA6NFU0 413 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 C21orf140B9A014 251 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 NKX2-8O15522 239 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 PSIP1O75475 530 aaKnown RBP22.15■■□□□ 1.14
CAPN1-222ENST00000532285 KLK3P07288 261 aaPredicted RBP22.15■■□□□ 1.14
CAPN1-222ENST00000532285 RPL21P46778 160 aaKnown RBP22.15■■□□□ 1.14
CAPN1-222ENST00000532285 LINC00303Q3SY05 128 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 CCSMST1Q4G0I0 132 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 HP1BP3Q5SSJ5 553 aaPredicted RBP22.15■■□□□ 1.14
CAPN1-222ENST00000532285 KIAA0408Q6ZU52 694 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 CNTN4Q8IWV2 1026 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 GPR135Q8IZ08 494 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 BBOF1Q8ND07 529 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 HMGCLL1Q8TB92 370 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 CT55Q8WUE5 264 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 INPP5DQ92835 1189 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 CERS2Q96G23 380 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 CFAP36Q96G28 342 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 SLC30A3Q99726 388 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 AARSD1Q9BTE6 412 aaKnown RBP22.15■■□□□ 1.14
CAPN1-222ENST00000532285 FAM114A2Q9NRY5 505 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 INTS7Q9NVH2 962 aaKnown RBP22.15■■□□□ 1.14
CAPN1-222ENST00000532285 SPATA7Q9P0W8 599 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 CHMP2BQ9UQN3 213 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 PCDHGA6Q9Y5G7 932 aa22.15■■□□□ 1.14
CAPN1-222ENST00000532285 MRPS18BQ9Y676 258 aaKnown RBP22.15■■□□□ 1.14
CAPN1-222ENST00000532285 E7EQ34 232 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 TP73O15350 636 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 VPS26AO75436 327 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 KATNA1O75449 491 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 FKBP9O95302 570 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 CATP04040 527 aaKnown RBP22.14■■□□□ 1.13
CAPN1-222ENST00000532285 CBSLP0DN79 551 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 ENO3P13929 434 aaPredicted RBP22.14■■□□□ 1.13
CAPN1-222ENST00000532285 CBSP35520 551 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 CDC20Q12834 499 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 GPS2Q13227 327 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 DNASE1L3Q13609 305 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 LY6DQ14210 128 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 SF1Q15637 639 aaKnown RBP22.14■■□□□ 1.13
CAPN1-222ENST00000532285 PRAMEF17Q5VTA0 474 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 TAX1BP1Q86VP1 789 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 LMNTD1Q8N9Z9 388 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 SLC38A9Q8NBW4 561 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 GIMAP7Q8NHV1 300 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 CLIP3Q96DZ5 547 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 GPR21Q99679 349 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 GPR87Q9BY21 358 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 ACTR5Q9H9F9 607 aaPredicted RBP22.14■■□□□ 1.13
CAPN1-222ENST00000532285 AKIRIN1Q9H9L7 192 aaPredicted RBP22.14■■□□□ 1.13
CAPN1-222ENST00000532285 PPANQ9NQ55 473 aaKnown RBP22.14■■□□□ 1.13
CAPN1-222ENST00000532285 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.14■■□□□ 1.13
CAPN1-222ENST00000532285 SNX24Q9Y343 169 aa22.14■■□□□ 1.13
CAPN1-222ENST00000532285 PRICKLE3O43900 615 aaPredicted RBP22.13■■□□□ 1.13
CAPN1-222ENST00000532285 PRB1P04280 392 aa22.13■■□□□ 1.13
CAPN1-222ENST00000532285 HBQ1P09105 142 aa22.13■■□□□ 1.13
CAPN1-222ENST00000532285 MPC1LP0DKB6 136 aa22.13■■□□□ 1.13
CAPN1-222ENST00000532285 PRKAR1AP10644 381 aa22.13■■□□□ 1.13
CAPN1-222ENST00000532285 MAGP20916 626 aa22.13■■□□□ 1.13
CAPN1-222ENST00000532285 OAS2P29728 719 aaKnown RBP22.13■■□□□ 1.13
CAPN1-222ENST00000532285 GABRA4P48169 554 aa22.13■■□□□ 1.13
CAPN1-222ENST00000532285 CARSP49589 748 aaKnown RBP22.13■■□□□ 1.13
CAPN1-222ENST00000532285 CUL1Q13616 776 aa22.13■■□□□ 1.13
CAPN1-222ENST00000532285 CYP2A13Q16696 494 aa22.13■■□□□ 1.13
CAPN1-222ENST00000532285 STEAP4Q687X5 459 aa22.13■■□□□ 1.13
CAPN1-222ENST00000532285 UGT3A1Q6NUS8 523 aa22.13■■□□□ 1.13
CAPN1-222ENST00000532285 FAM199XQ6PEV8 388 aaPredicted RBP22.13■■□□□ 1.13
CAPN1-222ENST00000532285 BORAQ6PGQ7 559 aa22.13■■□□□ 1.13
CAPN1-222ENST00000532285 ZNF517Q6ZMY9 492 aaPredicted RBP22.13■■□□□ 1.13
CAPN1-222ENST00000532285 GALNT7Q86SF2 657 aa22.13■■□□□ 1.13
CAPN1-222ENST00000532285 FAM20CQ8IXL6 584 aa22.13■■□□□ 1.13
CAPN1-222ENST00000532285 DSELQ8IZU8 1212 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms