RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 OR2M4Q96R27 311 aa18.29■□□□□ 0.52
SMPD1-203ENST00000527275 TIMM29Q9BSF4 260 aa18.29■□□□□ 0.52
SMPD1-203ENST00000527275 ZSCAN32Q9NX65 697 aa18.29■□□□□ 0.52
SMPD1-203ENST00000527275 ADAMTS6Q9UKP5 1117 aa18.29■□□□□ 0.52
SMPD1-203ENST00000527275 A0A1B0GTL3 188 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 H3BM21 787 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 TLR4O00206 839 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 UBDO15205 165 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 FFAR2O15552 330 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 MLYCDO95822 493 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 S100BP04271 92 aaPredicted RBP18.28■□□□□ 0.52
SMPD1-203ENST00000527275 RPL10P27635 214 aaKnown RBP18.28■□□□□ 0.52
SMPD1-203ENST00000527275 CSNK1EP49674 416 aaKnown RBP18.28■□□□□ 0.52
SMPD1-203ENST00000527275 RAP1GDS1P52306 607 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 EIF2B5Q13144 721 aaKnown RBP18.28■□□□□ 0.52
SMPD1-203ENST00000527275 CUL3Q13618 768 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 SCUBE1Q8IWY4 988 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 ZBTB44Q8NCP5 570 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 SPDYE1Q8NFV5 336 aaPredicted RBP18.28■□□□□ 0.52
SMPD1-203ENST00000527275 DLG3Q92796 817 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 KCNA7Q96RP8 456 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 RTKNQ9BST9 563 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 TMEM168Q9H0V1 697 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 TMEM74BQ9NUR3 256 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 OARD1Q9Y530 152 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 ASB1Q9Y576 335 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 DGKBQ9Y6T7 804 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 E2F3O00716 465 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 RASGRP1O95267 797 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 CYLC2Q14093 348 aaPredicted RBP18.28■□□□□ 0.52
SMPD1-203ENST00000527275 LARP4Q71RC2 724 aaKnown RBP eCLIP18.28■□□□□ 0.52
SMPD1-203ENST00000527275 PARGQ86W56 976 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 SNX32Q86XE0 403 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 TWIST2Q8WVJ9 160 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 C3orf30Q96M34 536 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 TCEAL2Q9H3H9 227 aaPredicted RBP18.28■□□□□ 0.52
SMPD1-203ENST00000527275 OSGEPL1Q9H4B0 414 aa18.28■□□□□ 0.52
SMPD1-203ENST00000527275 TNPO3Q9Y5L0 923 aaKnown RBP18.28■□□□□ 0.52
SMPD1-203ENST00000527275 TDRD6O60522 2096 aaKnown RBP18.28■□□□□ 0.52
SMPD1-203ENST00000527275 ATP6AP2A0A1C7CYW4 349 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 KLHL33A6NCF5 533 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 CRCPO75575 148 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 ATP6AP2O75787 350 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 VCLP18206 1134 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 CCND1P24385 295 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 AFF3P51826 1226 aaKnown RBP18.27■□□□□ 0.52
SMPD1-203ENST00000527275 PLOD1Q02809 727 aaPredicted RBP18.27■□□□□ 0.52
SMPD1-203ENST00000527275 DMPKQ09013 629 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 ABRQ12979 859 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 PCBP2Q15366 365 aaKnown RBP eCLIP18.27■□□□□ 0.52
SMPD1-203ENST00000527275 RBBP7Q16576 425 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 NEK10Q6ZWH5 1172 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 CEP68Q76N32 757 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 DCP2Q8IU60 420 aaKnown RBP18.27■□□□□ 0.52
SMPD1-203ENST00000527275 CFAP61Q8NHU2 1237 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 CCL4L1Q8NHW4 92 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 MAGEC3Q8TD91 643 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 ASB11Q8WXH4 323 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 DPEP2Q9H4A9 486 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 MRGBPQ9NV56 204 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 PSMD13Q9UNM6 376 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 PI4KAP42356 2102 aa18.27■□□□□ 0.52
SMPD1-203ENST00000527275 LRP4O75096 1905 aa18.27■□□□□ 0.51
SMPD1-203ENST00000527275 PIP5K1BO14986 540 aa18.27■□□□□ 0.51
SMPD1-203ENST00000527275 ENTPD5O75356 428 aa18.27■□□□□ 0.51
SMPD1-203ENST00000527275 MATN4O95460 622 aa18.27■□□□□ 0.51
SMPD1-203ENST00000527275 ESRRBO95718 433 aa18.27■□□□□ 0.51
SMPD1-203ENST00000527275 GUCA1CO95843 209 aa18.27■□□□□ 0.51
SMPD1-203ENST00000527275 PRDX3P30048 256 aaKnown RBP18.27■□□□□ 0.51
SMPD1-203ENST00000527275 CNR2P34972 360 aa18.27■□□□□ 0.51
SMPD1-203ENST00000527275 CTBSQ01459 385 aa18.27■□□□□ 0.51
SMPD1-203ENST00000527275 PHKG1Q16816 387 aa18.27■□□□□ 0.51
SMPD1-203ENST00000527275 SYVN1Q86TM6 617 aa18.27■□□□□ 0.51
SMPD1-203ENST00000527275 ULK2Q8IYT8 1036 aa18.27■□□□□ 0.51
SMPD1-203ENST00000527275 PDPRQ8NCN5 879 aa18.27■□□□□ 0.51
SMPD1-203ENST00000527275 CLPTM1LQ96KA5 538 aa18.27■□□□□ 0.51
SMPD1-203ENST00000527275 OR52A5Q9H2C5 316 aa18.27■□□□□ 0.51
SMPD1-203ENST00000527275 ZFC3H1O60293 1989 aaKnown RBP18.26■□□□□ 0.51
SMPD1-203ENST00000527275 ZNF318Q5VUA4 2279 aa18.26■□□□□ 0.51
SMPD1-203ENST00000527275 CACNA1EQ15878 2313 aa18.26■□□□□ 0.51
SMPD1-203ENST00000527275 KMT2EQ8IZD2 1858 aa18.26■□□□□ 0.51
SMPD1-203ENST00000527275 CUL9Q8IWT3 2517 aa18.26■□□□□ 0.51
SMPD1-203ENST00000527275 GIPC1O14908 333 aa18.26■□□□□ 0.51
SMPD1-203ENST00000527275 MPC1LP0DKB6 136 aa18.26■□□□□ 0.51
SMPD1-203ENST00000527275 ITGAXP20702 1163 aa18.26■□□□□ 0.51
SMPD1-203ENST00000527275 AK4P27144 223 aaPredicted RBP18.26■□□□□ 0.51
SMPD1-203ENST00000527275 RPA4Q13156 261 aa18.26■□□□□ 0.51
SMPD1-203ENST00000527275 HERC3Q15034 1050 aa18.26■□□□□ 0.51
SMPD1-203ENST00000527275 C18orf21Q32NC0 220 aaPredicted RBP18.26■□□□□ 0.51
SMPD1-203ENST00000527275 DDIASQ8IXT1 998 aa18.26■□□□□ 0.51
SMPD1-203ENST00000527275 ZC3H10Q96K80 434 aaKnown RBP18.26■□□□□ 0.51
SMPD1-203ENST00000527275 TUBB1Q9H4B7 451 aa18.26■□□□□ 0.51
SMPD1-203ENST00000527275 AKTIPQ9H8T0 292 aa18.26■□□□□ 0.51
SMPD1-203ENST00000527275 TRNAU1APQ9NX07 287 aaKnown RBP18.26■□□□□ 0.51
SMPD1-203ENST00000527275 ZNF225Q9UK10 706 aa18.26■□□□□ 0.51
SMPD1-203ENST00000527275 PTBP2Q9UKA9 531 aaKnown RBP18.26■□□□□ 0.51
SMPD1-203ENST00000527275 CACNA1HO95180 2353 aa18.26■□□□□ 0.51
SMPD1-203ENST00000527275 PRR19A6NJB7 356 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 GFYI3L273 518 aa18.25■□□□□ 0.51
SMPD1-203ENST00000527275 VILLO15195 856 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms