RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 MIOSQ9NXC5 875 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 MRPL15Q9P015 296 aaKnown RBP5.53□□□□□ -1.52
CPNE3-206ENST00000523469 NARFQ9UHQ1 456 aa5.53□□□□□ -1.52
CPNE3-206ENST00000523469 SOS1Q07889 1333 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-206ENST00000523469 A0A087WYN8 130 aa5.52□□□□□ -1.53
CPNE3-206ENST00000523469 PGM3O95394 542 aa5.52□□□□□ -1.53
CPNE3-206ENST00000523469 MT3P25713 68 aa5.52□□□□□ -1.53
CPNE3-206ENST00000523469 IGSF11Q5DX21 431 aa5.52□□□□□ -1.53
CPNE3-206ENST00000523469 Q6ZTC4 211 aa5.52□□□□□ -1.53
CPNE3-206ENST00000523469 MARK2Q7KZI7 788 aaKnown RBP5.52□□□□□ -1.53
CPNE3-206ENST00000523469 LINC00346Q8IVM7 164 aa5.52□□□□□ -1.53
CPNE3-206ENST00000523469 CNBD1Q8NA66 436 aa5.52□□□□□ -1.53
CPNE3-206ENST00000523469 PTPMT1Q8WUK0 201 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-206ENST00000523469 ERLEC1Q96DZ1 483 aa5.52□□□□□ -1.53
CPNE3-206ENST00000523469 ZNF582Q96NG8 517 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-206ENST00000523469 MRPL1Q9BYD6 325 aaKnown RBP5.52□□□□□ -1.53
CPNE3-206ENST00000523469 ZBTB20Q9HC78 741 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-206ENST00000523469 MBNL1Q9NR56 388 aaKnown RBP5.52□□□□□ -1.53
CPNE3-206ENST00000523469 SLC38A7Q9NVC3 462 aa5.52□□□□□ -1.53
CPNE3-206ENST00000523469 TRIM17Q9Y577 477 aa5.52□□□□□ -1.53
CPNE3-206ENST00000523469 A0A1W2PP64 1363 aa5.52□□□□□ -1.53
CPNE3-206ENST00000523469 COL4A5P29400 1685 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 GREB1LQ9C091 1923 aaPredicted RBP5.51□□□□□ -1.53
CPNE3-206ENST00000523469 LOC102723996A0A087X1L8 192 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 TEX13DA0A0J9YY54 714 aaPredicted RBP5.51□□□□□ -1.53
CPNE3-206ENST00000523469 A8MV72 311 aaPredicted RBP5.51□□□□□ -1.53
CPNE3-206ENST00000523469 TO15178 435 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 SSX4O60224 188 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 CREG1O75629 220 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 H1F0P07305 194 aaKnown RBP5.51□□□□□ -1.53
CPNE3-206ENST00000523469 PRSS1P07477 247 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 HSD17B4P51659 736 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 PLA2G7Q13093 441 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 DMP1Q13316 513 aaPredicted RBP5.51□□□□□ -1.53
CPNE3-206ENST00000523469 GRAPQ13588 217 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 PRR5LQ6MZQ0 368 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 USP43Q70EL4 1123 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 ADGRA1Q86SQ6 560 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 GPALPP1Q8IXQ4 340 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 SCML4Q8N228 414 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 DEFB123Q8N688 67 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 L3MBTL4Q8NA19 623 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 KLHDC9Q8NEP7 349 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 APPL2Q8NEU8 664 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 ZNF473Q8WTR7 871 aaKnown RBP5.51□□□□□ -1.53
CPNE3-206ENST00000523469 STAMBPL1Q96FJ0 436 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 FAM81BQ96LP2 452 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 MOV10L1Q9BXT6 1211 aaKnown RBP5.51□□□□□ -1.53
CPNE3-206ENST00000523469 TERF2IPQ9NYB0 399 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 CHORDC1Q9UHD1 332 aaPredicted RBP5.51□□□□□ -1.53
CPNE3-206ENST00000523469 RPS6KA6Q9UK32 745 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 JRKLQ9Y4A0 524 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 UNC80Q8N2C7 3258 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 FLT4P35916 1363 aa5.51□□□□□ -1.53
CPNE3-206ENST00000523469 GLOD5A6NK44 160 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 MAGEB17A8MXT2 336 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 ERVV-2B6SEH9 535 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 FAM72CH0Y354 149 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 PRAMEF11O60813 436 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 STARD3NLO95772 234 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 TPOP07202 933 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 SP1P08047 785 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 GJA1P17302 382 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 TIMP3P35625 211 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 PSMC4P43686 418 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 MFAP5Q13361 173 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 BAATQ14032 418 aaPredicted RBP5.5□□□□□ -1.53
CPNE3-206ENST00000523469 FAM72AQ5TYM5 149 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 FAM72DQ6L9T8 149 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 SLC27A1Q6PCB7 646 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 OLFM4Q6UX06 510 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 FAM72BQ86X60 149 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 GUF1Q8N442 669 aaKnown RBP5.5□□□□□ -1.53
CPNE3-206ENST00000523469 MINDY1Q8N5J2 469 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 PAPD5Q8NDF8 572 aaKnown RBP5.5□□□□□ -1.53
CPNE3-206ENST00000523469 WDR20Q8TBZ3 569 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 MTERF3Q96E29 417 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 PRMT6Q96LA8 375 aaPredicted RBP5.5□□□□□ -1.53
CPNE3-206ENST00000523469 ZNF354BQ96LW1 612 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 NEK1Q96PY6 1258 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 CDRT15Q96T59 188 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.5□□□□□ -1.53
CPNE3-206ENST00000523469 TXLNGQ9NUQ3 528 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 WBP11Q9Y2W2 641 aaKnown RBP5.5□□□□□ -1.53
CPNE3-206ENST00000523469 CACNA1AO00555 2505 aa5.5□□□□□ -1.53
CPNE3-206ENST00000523469 GPR75-ASB3A0A0A6YYF3 556 aa5.49□□□□□ -1.53
CPNE3-206ENST00000523469 PRSS51A0A1B0GVH4 220 aa5.49□□□□□ -1.53
CPNE3-206ENST00000523469 MED19A0JLT2 244 aaPredicted RBP5.49□□□□□ -1.53
CPNE3-206ENST00000523469 ELOVL7A1L3X0 281 aa5.49□□□□□ -1.53
CPNE3-206ENST00000523469 SYNCRIPO60506 623 aaKnown RBP5.49□□□□□ -1.53
CPNE3-206ENST00000523469 ZWINTO95229 277 aa5.49□□□□□ -1.53
CPNE3-206ENST00000523469 HSP90AB1P08238 724 aaKnown RBP5.49□□□□□ -1.53
CPNE3-206ENST00000523469 CKMT2P17540 419 aa5.49□□□□□ -1.53
CPNE3-206ENST00000523469 MSH3P20585 1137 aa5.49□□□□□ -1.53
CPNE3-206ENST00000523469 DCTP40126 519 aa5.49□□□□□ -1.53
CPNE3-206ENST00000523469 NNMTP40261 264 aa5.49□□□□□ -1.53
CPNE3-206ENST00000523469 LMAN1P49257 510 aa5.49□□□□□ -1.53
CPNE3-206ENST00000523469 NR1D2Q14995 579 aa5.49□□□□□ -1.53
CPNE3-206ENST00000523469 KRTAP24-1Q3LI83 254 aa5.49□□□□□ -1.53
CPNE3-206ENST00000523469 CLEC4GQ6UXB4 293 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms