RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 DUXAA6NLW8 204 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 GAPDHSO14556 408 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 MEIS2O14770 477 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 BAG4O95429 457 aaKnown RBP4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 H1F0P07305 194 aaKnown RBP4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 CDH1P12830 882 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 DAOP14920 347 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 CD27P26842 260 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 RPL21P46778 160 aaKnown RBP4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 MFAP3P55082 362 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 EEF1A1P68104 462 aaKnown RBP4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 COASYQ13057 564 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 MORF4L2Q15014 288 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 UGT3A2Q3SY77 523 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 EEF1A1P5Q5VTE0 462 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 SFMBT2Q5VUG0 894 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 SPSB3Q6PJ21 355 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 GBP6Q6ZN66 633 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 NUDT13Q86X67 352 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 VANGL1Q8TAA9 524 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 GRHL3Q8TE85 626 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 SYN2Q92777 582 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 CENPTQ96BT3 561 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 ADGRG7Q96K78 797 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 PARK7Q99497 189 aaKnown RBP4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 DDX31Q9H8H2 851 aaKnown RBP4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 VDAC3Q9Y277 283 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 RPGRIP1LQ68CZ1 1315 aa4.36□□□□□ -1.71
HMGB1P1-201ENST00000522557 MYH14Q7Z406 1995 aaKnown RBP4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 IGHV4OR15-8A0A075B7B6 117 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 A0A1W2PPI3 338 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 SMTNL1A8MU46 457 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 TULP2O00295 520 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 IGHV4-39P01824 125 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 NR1D1P20393 614 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 WNT5AP41221 380 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 RGS7P49802 495 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 PEX5P50542 639 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 GAS1P54826 345 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 MLLT10P55197 1068 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 ERVFC1-1P60608 527 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 GAGE5Q13069 117 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 GAGE6Q13070 117 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 PLA2G7Q13093 441 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 KIR2DS3Q14952 304 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 PTGISQ16647 500 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 KIF19Q2TAC6 998 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 TCTE1Q5JU00 501 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 NDUFAF5Q5TEU4 345 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 FAM171BQ6P995 826 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 MUC20Q8N307 709 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 OR7G3Q8NG95 312 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 SORCS1Q8WY21 1168 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 P2RX5Q93086 422 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 OXNAD1Q96HP4 312 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 MYADMQ96S97 322 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 PI4K2AQ9BTU6 479 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 TRPC7Q9HCX4 862 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 IL1RAPL2Q9NP60 686 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 COQ3Q9NZJ6 369 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 CPSF3Q9UKF6 684 aaKnown RBP4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 WDR83OSQ9Y284 106 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 PCDHGA1Q9Y5H4 931 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 SNX5Q9Y5X3 404 aa4.35□□□□□ -1.71
HMGB1P1-201ENST00000522557 YDJCA8MPS7 323 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 ST8SIA3O43173 380 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 KINO60870 393 aaKnown RBP4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 CTSVO60911 334 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 SLC16A8O95907 504 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 INHBAP08476 426 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 VIMP08670 466 aaKnown RBP4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 SMIM18P0DKX4 95 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 PSMB4P28070 264 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 CASP3P42574 277 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 FRKP42685 505 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 CDX1P47902 265 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 KHKP50053 298 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 CX3CL1P78423 397 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 SLC39A14Q15043 492 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 ENPP7Q6UWV6 458 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 SYCP3Q8IZU3 236 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 THAP8Q8NA92 274 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 UXS1Q8NBZ7 420 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 SPATA3Q8NHX4 192 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 DNASE2BQ8WZ79 361 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 IRGQQ8WZA9 623 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 BCL2L2Q92843 193 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 RIT1Q92963 219 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 LINGO1Q96FE5 620 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 SLC2A11Q9BYW1 496 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 TMEM206Q9H813 350 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 ZNF556Q9HAH1 456 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 PELI2Q9HAT8 420 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 GKN1Q9NS71 199 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 DNAJC17Q9NVM6 304 aaKnown RBP4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 SLCO1C1Q9NYB5 712 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 TBC1D7Q9P0N9 293 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 CACNG4Q9UBN1 327 aa4.34□□□□□ -1.71
HMGB1P1-201ENST00000522557 SMCHD1A6NHR9 2005 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms