RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 PGM2L1Q6PCE3 622 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 TMEM220Q6QAJ8 160 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 KIAA1324Q6UXG2 1013 aaKnown RBP13.53□□□□□ -0.24
SYNPO-205ENST00000522122 ZNF534Q76KX8 674 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 ZNF347Q96SE7 839 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 GPATCH1Q9BRR8 931 aaKnown RBP13.53□□□□□ -0.24
SYNPO-205ENST00000522122 TTLL2Q9BWV7 592 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 LIN28AQ9H9Z2 209 aaKnown RBP13.53□□□□□ -0.24
SYNPO-205ENST00000522122 MAGEE1Q9HCI5 957 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 A0A0U1RQF3 1178 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 LCHNA4D1U4 455 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 RPLP0P05388 317 aaKnown RBP13.53□□□□□ -0.24
SYNPO-205ENST00000522122 LAMP2P13473 410 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 SDC2P34741 201 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 CYP4F8P98187 520 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 AGMOQ6ZNB7 445 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 CCDC80Q76M96 950 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 IPCEF1Q8WWN9 437 aaPredicted RBP13.53□□□□□ -0.24
SYNPO-205ENST00000522122 PYCR2Q96C36 320 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 AMBNQ9NP70 447 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 TMEM138Q9NPI0 162 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 ZNF221Q9UK13 617 aa13.53□□□□□ -0.24
SYNPO-205ENST00000522122 GRID2O43424 1007 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 C9P02748 559 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 CYP11A1P05108 521 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 PRKCGP05129 697 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 C8BP07358 591 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 GMPRP36959 345 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 GRM2Q14416 872 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 RPS27LQ71UM5 84 aaKnown RBP13.52□□□□□ -0.24
SYNPO-205ENST00000522122 CTU1Q7Z7A3 348 aaKnown RBP13.52□□□□□ -0.24
SYNPO-205ENST00000522122 KIAA1191Q96A73 305 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 TRIM8Q9BZR9 551 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 RACGAP1Q9H0H5 632 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 ADAMTS10Q9H324 1103 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 GKN1Q9NS71 199 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 CCM2LQ9NUG4 571 aaPredicted RBP13.52□□□□□ -0.24
SYNPO-205ENST00000522122 GIN1Q9NXP7 522 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 TMA7Q9Y2S6 64 aaKnown RBP13.52□□□□□ -0.24
SYNPO-205ENST00000522122 PCDHGB3Q9Y5G1 929 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 CLIC1O00299 241 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 ATP6V1G1O75348 118 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 RASAL1O95294 804 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 PAPSS2O95340 614 aaPredicted RBP13.52□□□□□ -0.24
SYNPO-205ENST00000522122 AZGP1P25311 298 aaKnown RBP13.52□□□□□ -0.24
SYNPO-205ENST00000522122 UFM1P61960 85 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 SCAPQ12770 1279 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 MOGQ16653 247 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 ZNF829Q3KNS6 432 aaPredicted RBP13.52□□□□□ -0.24
SYNPO-205ENST00000522122 RNF19BQ6ZMZ0 732 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 OR10G6Q8NH81 332 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 FBRSL1Q9HCM7 1045 aaKnown RBP13.52□□□□□ -0.24
SYNPO-205ENST00000522122 KCTD3Q9Y597 815 aa13.52□□□□□ -0.24
SYNPO-205ENST00000522122 EFCAB9A8MZ26 197 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 FAM72CH0Y354 149 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 NME6O75414 186 aaPredicted RBP13.52□□□□□ -0.25
SYNPO-205ENST00000522122 FMO3P31513 532 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 FAM72AQ5TYM5 149 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 FAM72DQ6L9T8 149 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 CES5AQ6NT32 575 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 SLC2A7Q6PXP3 512 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 DLK2Q6UY11 383 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 FAM72BQ86X60 149 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 GOLM1Q8NBJ4 401 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 NARS2Q96I59 477 aaKnown RBP13.52□□□□□ -0.25
SYNPO-205ENST00000522122 SPACA7Q96KW9 195 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 DEFB118Q96PH6 123 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 WRAP53Q9BUR4 548 aaKnown RBP13.52□□□□□ -0.25
SYNPO-205ENST00000522122 PCDHGA7Q9Y5G6 932 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 WNK3Q9BYP7 1800 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 ANKRD66B4E2M5 251 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 SLC22A1O15245 554 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 PI15O43692 258 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 CCNDBP1O95273 360 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 MYBPC1Q00872 1141 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 IL18Q14116 193 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 LARS2Q15031 903 aaKnown RBP13.52□□□□□ -0.25
SYNPO-205ENST00000522122 PPP1R3AQ16821 1122 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 TMEM130Q8N3G9 435 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 ZBTB8BQ8NAP8 495 aaPredicted RBP13.52□□□□□ -0.25
SYNPO-205ENST00000522122 FNDC8Q8TC99 324 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 DERL2Q9GZP9 239 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 RSPH9Q9H1X1 276 aaPredicted RBP13.52□□□□□ -0.25
SYNPO-205ENST00000522122 SOHLH2Q9NX45 425 aa13.52□□□□□ -0.25
SYNPO-205ENST00000522122 FZD9O00144 591 aa13.51□□□□□ -0.25
SYNPO-205ENST00000522122 HAS3O00219 553 aa13.51□□□□□ -0.25
SYNPO-205ENST00000522122 IDSP22304 550 aa13.51□□□□□ -0.25
SYNPO-205ENST00000522122 STC1P52823 247 aa13.51□□□□□ -0.25
SYNPO-205ENST00000522122 SEMG2Q02383 582 aa13.51□□□□□ -0.25
SYNPO-205ENST00000522122 PPP1R8Q12972 351 aaKnown RBP13.51□□□□□ -0.25
SYNPO-205ENST00000522122 BNIP3Q12983 259 aa13.51□□□□□ -0.25
SYNPO-205ENST00000522122 TUBA3CQ13748 450 aa13.51□□□□□ -0.25
SYNPO-205ENST00000522122 NPTX1Q15818 432 aa13.51□□□□□ -0.25
SYNPO-205ENST00000522122 RABL3Q5HYI8 236 aa13.51□□□□□ -0.25
SYNPO-205ENST00000522122 LIN54Q6MZP7 749 aa13.51□□□□□ -0.25
SYNPO-205ENST00000522122 ZNF773Q6PK81 442 aa13.51□□□□□ -0.25
SYNPO-205ENST00000522122 CEP97Q8IW35 865 aa13.51□□□□□ -0.25
SYNPO-205ENST00000522122 GJD3Q8N144 294 aa13.51□□□□□ -0.25
SYNPO-205ENST00000522122 FBXL20Q96IG2 436 aa13.51□□□□□ -0.25
SYNPO-205ENST00000522122 SLC32A1Q9H598 525 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms