RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	PDSS1	Q5T2R2	415 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	STXBP5	Q5T5C0	1151 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	KLHL10	Q6JEL2	608 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	RSRC2	Q7L4I2	434 aa	Known RBP	4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	LINGO2	Q7L985	606 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	DEFB128	Q7Z7B8	93 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	RPAIN	Q86UA6	219 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	SLC35F3	Q8IY50	421 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	KIAA0895	Q8NCT3	520 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	OR2AK2	Q8NG84	335 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	FAM76A	Q8TAV0	307 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	NOC3L	Q8WTT2	800 aa	Known RBP	4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	CRYGN	Q8WXF5	182 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	MRPL38	Q96DV4	380 aa	Known RBP	4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	RRP36	Q96EU6	259 aa	Known RBP	4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	MTMR9	Q96QG7	549 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	F2RL3	Q96RI0	385 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	RAD9A	Q99638	391 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	NCAPG	Q9BPX3	1015 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	DESI2	Q9BSY9	194 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	LRRC1	Q9BTT6	524 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	PHF7	Q9BWX1	381 aa	Predicted RBP	4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	BARHL1	Q9BZE3	327 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	TRIM9	Q9C026	710 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	UPF3A	Q9H1J1	476 aa	Known RBP	4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	CPVL	Q9H3G5	476 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	C6orf50	Q9HD87	102 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	BLOC1S4	Q9NUP1	217 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZNF446	Q9NWS9	450 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	TAB2	Q9NYJ8	693 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	SEC63	Q9UGP8	760 aa	Known RBP	4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	MUTYH	Q9UIF7	546 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	FBXO9	Q9UK97	447 aa	Predicted RBP	4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	STX8	Q9UNK0	236 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	TRIO	O75962	3097 aa		4.23	□□□□□ -1.73
RUFY3-215	ENST00000515479	TPR	P12270	2363 aa	Known RBP	4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	CIT	O14578	2027 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	TRIP11	Q15643	1979 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479		A0A1B0GU03	582 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	EPOP	A6NHQ4	379 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	PMS2P5	A8MQ11	134 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479		H3BQ06	376 aa	Predicted RBP	4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	PSMA7	O14818	248 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	SLC37A4	O43826	429 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	FLOT1	O75955	427 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	TDP2	O95551	362 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	HEXA	P06865	529 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	GALT	P07902	379 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	GCFC2	P16383	781 aa	Known RBP	4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	CCNE1	P24864	410 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	GNA11	P29992	359 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	CASP14	P31944	242 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	CCT6A	P40227	531 aa	Known RBP	4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	GPD2	P43304	727 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	HSD17B4	P51659	736 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	RAD23B	P54727	409 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	TDG	Q13569	410 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	ACVR2B	Q13705	512 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	TMEM30B	Q3MIR4	351 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZCWPW2	Q504Y3	356 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	SLC45A4	Q5BKX6	768 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	WDR45B	Q5MNZ6	344 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	HYI	Q5T013	277 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	ARHGAP11A	Q6P4F7	1023 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	MOXD1	Q6UVY6	613 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	LCTL	Q6UWM7	567 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZNF852	Q6ZMS4	543 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	ASCL5	Q7RTU5	278 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	TDRP	Q86YL5	185 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	TMTC1	Q8IUR5	882 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZC3H3	Q8IXZ2	948 aa	Known RBP	4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	ZBTB2	Q8N680	514 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	PLD5	Q8N7P1	536 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	C11orf65	Q8NCR3	313 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	TAS1R2	Q8TE23	839 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	TBCK	Q8TEA7	893 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	P2RX5	Q93086	422 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	ELP4	Q96EB1	424 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	MBOAT7	Q96N66	472 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	MYCBP	Q99417	103 aa	Predicted RBP	4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	CMKLR1	Q99788	373 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	RIC8A	Q9NPQ8	531 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	ITM2C	Q9NQX7	267 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	FAM118A	Q9NWS6	357 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	LSM4	Q9Y4Z0	139 aa	Known RBP	4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479		V9GYY5	206 aa	Predicted RBP	4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	PTPRS	Q13332	1948 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	MICAL3	Q7RTP6	2002 aa		4.22	□□□□□ -1.73
RUFY3-215	ENST00000515479	KDM3A	Q9Y4C1	1321 aa		4.21	□□□□□ -1.73
RUFY3-215	ENST00000515479	ATRX	P46100	2492 aa		4.21	□□□□□ -1.73
RUFY3-215	ENST00000515479	CHD8	Q9HCK8	2581 aa		4.21	□□□□□ -1.73
RUFY3-215	ENST00000515479	PVALEF	A0A1B0GWK0	134 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	BICDL2	A1A5D9	508 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	FRMD3	A2A2Y4	597 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	SMCO2	A6NFE2	343 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	ZBTB5	O15062	677 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	WDR46	O15213	610 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms