RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 THOC7Q6I9Y2 204 aaKnown RBP7.25□□□□□ -1.25
CLIP1-205ENST00000514271 Q6ZNB5 142 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 PRR23CQ6ZRP0 262 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 CHST9Q7L1S5 443 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 ZNF551Q7Z340 670 aaPredicted RBP7.25□□□□□ -1.25
CLIP1-205ENST00000514271 SCD5Q86SK9 330 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 KCNMB4Q86W47 210 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 DHFR2Q86XF0 187 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 NLGN4XQ8N0W4 816 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 GALNT4Q8N4A0 578 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 OR52K1Q8NGK4 314 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 OR2T11Q8NH01 316 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 UBA3Q8TBC4 463 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 BRSK1Q8TDC3 778 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 NXNL1Q96CM4 212 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 MOGAT1Q96PD6 335 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 FCRL5Q96RD9 977 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 CEP41Q9BYV8 373 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 TM9SF3Q9HD45 589 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 NDRG4Q9ULP0 352 aaKnown RBP7.25□□□□□ -1.25
CLIP1-205ENST00000514271 TBC1D24Q9ULP9 559 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 A0A1W2PP18 115 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 M0R082 166 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 LEFTY2O00292 366 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 AREL1O15033 823 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 COCHO43405 550 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 CNTN5O94779 1100 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 IPO13O94829 963 aaKnown RBP7.25□□□□□ -1.25
CLIP1-205ENST00000514271 PAHP00439 452 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 SDC4P31431 198 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 CASP3P42574 277 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 GPR15P49685 360 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 NEK2P51955 445 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 POU4F1Q01851 419 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 NR1D2Q14995 579 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 DUSP7Q16829 419 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 TYSND1Q2T9J0 566 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 PAGE3Q5JUK9 113 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 C6orf141Q5SZD1 244 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 GPR107Q5VW38 600 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 CCDC190Q86UF4 302 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 RNF135Q8IUD6 432 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 RASGRP3Q8IV61 690 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 BEND7Q8N7W2 519 aaPredicted RBP7.25□□□□□ -1.25
CLIP1-205ENST00000514271 DDHD1Q8NEL9 900 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 OR9I1Q8NGQ6 314 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 KCTD4Q8WVF5 259 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 CYGBQ8WWM9 190 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 CLPBQ9H078 707 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 MAGIXQ9H6Y5 334 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 CHRAC1Q9NRG0 131 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 HCFC1R1Q9NWW0 138 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 XPR1Q9UBH6 696 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 INTS6Q9UL03 887 aaKnown RBP7.25□□□□□ -1.25
CLIP1-205ENST00000514271 GOLGA8QA0A0J9YX86 632 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 SERTM1A2A2V5 107 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 GOLGA8OA6NCC3 632 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CFAP99D6REC4 459 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 GOLGA8NF8WBI6 632 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 AURKAO14965 403 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 LSM1O15116 133 aaKnown RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 KMOO15229 486 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 WBP4O75554 376 aaKnown RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 BEST1O76090 585 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CDK14O94921 469 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 PGLSO95336 258 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 LCP1P13796 627 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CD1DP15813 335 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 DRD1P21728 446 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 SLC1A2P43004 574 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 ST13P50502 369 aaKnown RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CLCN5P51795 746 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 FOXA1P55317 472 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 ITGA1P56199 1179 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 HERVK_113P63132 956 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 SERINC3Q13530 473 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 KEAP1Q14145 624 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 EIF4HQ15056 248 aaKnown RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 ZNF181Q2M3W8 571 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 PKN3Q6P5Z2 889 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 GALNT18Q6P9A2 607 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CEP68Q76N32 757 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CUZD1Q86UP6 607 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 DCP2Q8IU60 420 aaKnown RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 TBC1D21Q8IYX1 336 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 PGBD5Q8N414 524 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 HJURPQ8NCD3 748 aaPredicted RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 ZNF548Q8NEK5 533 aaPredicted RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 RNF34Q969K3 372 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 REPS1Q96D71 796 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 MARK4Q96L34 752 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 ZNF583Q96ND8 569 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 SNX18Q96RF0 628 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 ERVK-6Q9BXR3 956 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 AKTIPQ9H8T0 292 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 KCNK12Q9HB15 430 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 TMPRSS4Q9NRS4 437 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 SACM1LQ9NTJ5 587 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 PLCXD1Q9NUJ7 323 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 MID2Q9UJV3 735 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms