RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 SLC22A18Q96BI1 424 aa22.13■■□□□ 1.13
SNF8-209ENST00000510558 DPH2Q9BQC3 489 aaPredicted RBP22.13■■□□□ 1.13
SNF8-209ENST00000510558 RAB11FIP5Q9BXF6 653 aa22.13■■□□□ 1.13
SNF8-209ENST00000510558 SPRTNQ9H040 489 aaPredicted RBP22.13■■□□□ 1.13
SNF8-209ENST00000510558 XAB2Q9HCS7 855 aaKnown RBP22.13■■□□□ 1.13
SNF8-209ENST00000510558 IL1RAPL1Q9NZN1 696 aa22.13■■□□□ 1.13
SNF8-209ENST00000510558 TLK1Q9UKI8 766 aa22.13■■□□□ 1.13
SNF8-209ENST00000510558 TCFL5Q9UL49 500 aa22.13■■□□□ 1.13
SNF8-209ENST00000510558 RUVBL2Q9Y230 463 aaKnown RBP22.13■■□□□ 1.13
SNF8-209ENST00000510558 CRYL1Q9Y2S2 319 aa22.13■■□□□ 1.13
SNF8-209ENST00000510558 AP1M2Q9Y6Q5 423 aa22.13■■□□□ 1.13
SNF8-209ENST00000510558 MED13Q9UHV7 2174 aa22.13■■□□□ 1.13
SNF8-209ENST00000510558 CCDC88CQ9P219 2028 aa22.13■■□□□ 1.13
SNF8-209ENST00000510558 FAM237BA0A1B0GVD1 139 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 H3BMM5 538 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 GOLGA8MH3BSY2 632 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 PHF2O75151 1096 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 C1orf105O95561 183 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 S1PR4O95977 384 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 ESR1P03372 595 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 NR1D1P20393 614 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 AGXTP21549 392 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 ADARP55265 1226 aaKnown RBP22.12■■□□□ 1.13
SNF8-209ENST00000510558 DHX34Q14147 1143 aaKnown RBP22.12■■□□□ 1.13
SNF8-209ENST00000510558 NCF4Q15080 339 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 TCTN3Q6NUS6 607 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 NEPROQ6NW34 567 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 CILP2Q8IUL8 1156 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 ADAMTS17Q8TE56 1095 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 RAD51AP1Q96B01 352 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 ZNF669Q96BR6 464 aaPredicted RBP22.12■■□□□ 1.13
SNF8-209ENST00000510558 SERPINB12Q96P63 405 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 TRIM55Q9BYV6 548 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 ANAPC2Q9UJX6 822 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 PLCL2Q9UPR0 1127 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 KLHL20Q9Y2M5 609 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 MRFAP1Q9Y605 127 aa22.12■■□□□ 1.13
SNF8-209ENST00000510558 GOLGA6L10A0A0M3HER8 536 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 MAGEB16A2A368 324 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 SDR42E2A6NKP2 422 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 C9J4A7 227 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 K7EM74 188 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 ZSCAN9O15535 394 aaPredicted RBP22.11■■□□□ 1.13
SNF8-209ENST00000510558 DNAJB5O75953 348 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 CTSBP07858 339 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 FNTAP49354 379 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 TLE1Q04724 770 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 GBX1Q14549 363 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 CCSMST1Q4G0I0 132 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 ANKRD20A4Q4UJ75 823 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 FAM69BQ5VUD6 431 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 CPZQ66K79 652 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 RHBDD2Q6NTF9 364 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 CNSTQ6PJW8 725 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 CENPUQ71F23 418 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 GRK7Q8WTQ7 553 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 FAM136AQ96C01 138 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 FOPNLQ96NB1 174 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 KCNF1Q9H3M0 494 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.11■■□□□ 1.13
SNF8-209ENST00000510558 TSR3Q9UJK0 312 aaKnown RBP22.11■■□□□ 1.13
SNF8-209ENST00000510558 SNX12Q9UMY4 172 aa22.11■■□□□ 1.13
SNF8-209ENST00000510558 TNRC6AQ8NDV7 1962 aaKnown RBP22.1■■□□□ 1.13
SNF8-209ENST00000510558 KIF5CO60282 957 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 CBSLP0DN79 551 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 CHRM3P20309 590 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 CBSP35520 551 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 CCNFP41002 786 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 CSRP3P50461 194 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 KCNC4Q03721 635 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 C1orf189Q5VU69 101 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 ZNF470Q6ECI4 717 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 TLDC1Q6P9B6 456 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 ZNF655Q8N720 491 aaPredicted RBP22.1■■□□□ 1.13
SNF8-209ENST00000510558 EPN3Q9H201 632 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 CLMPQ9H6B4 373 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 INTS7Q9NVH2 962 aaKnown RBP22.1■■□□□ 1.13
SNF8-209ENST00000510558 INTS10Q9NVR2 710 aaKnown RBP22.1■■□□□ 1.13
SNF8-209ENST00000510558 IRAK4Q9NWZ3 460 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 TRMT1Q9NXH9 659 aaKnown RBP22.1■■□□□ 1.13
SNF8-209ENST00000510558 EURLQ9NYK6 297 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 SRPK3Q9UPE1 567 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 VPS9D1Q9Y2B5 631 aa22.1■■□□□ 1.13
SNF8-209ENST00000510558 ZCWPW2A0A1B0GU75 182 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 KRT87PA6NCN2 255 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 ARGFXA6NJG6 315 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 CES2O00748 559 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 ZNF185O15231 689 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 PRICKLE3O43900 615 aaPredicted RBP22.09■■□□□ 1.13
SNF8-209ENST00000510558 PKMP14618 531 aaKnown RBP22.09■■□□□ 1.13
SNF8-209ENST00000510558 ATP5DP30049 168 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 CASRP41180 1078 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 PTGIRP43119 386 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 MAGEA3P43357 314 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 CHAF1BQ13112 559 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 THOC5Q13769 683 aaKnown RBP22.09■■□□□ 1.13
SNF8-209ENST00000510558 SF1Q15637 639 aaKnown RBP22.09■■□□□ 1.13
SNF8-209ENST00000510558 RAB42Q8N4Z0 105 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 NAT8LQ8N9F0 302 aa22.09■■□□□ 1.13
SNF8-209ENST00000510558 PROKR1Q8TCW9 393 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms