RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 FASTKQ14296 549 aaKnown RBP6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 CLPPQ16740 277 aaPredicted RBP6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 WHAMMP3Q1A5X7 153 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 AARS2Q5JTZ9 985 aaKnown RBP6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 SPANXN3Q5MJ09 141 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 PRAMEF17Q5VTA0 474 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 ARMC3Q5W041 872 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 ANKS6Q68DC2 871 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 WDR74Q6RFH5 385 aaPredicted RBP6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 PCSK4Q6UW60 755 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 CYHR1Q6ZMK1 362 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 MBOAT1Q6ZNC8 495 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 RAB11FIP2Q7L804 512 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 TIPARPQ7Z3E1 657 aaKnown RBP6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 TAX1BP1Q86VP1 789 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 ZFAND4Q86XD8 727 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 TRIM48Q8IWZ4 208 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 GSPT2Q8IYD1 628 aaKnown RBP6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 CPNE9Q8IYJ1 553 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 FBXO39Q8N4B4 442 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 MMGT1Q8N4V1 131 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 OTUD6BQ8N6M0 293 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 OR10G6Q8NH81 332 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 OR5K2Q8NHB8 316 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 WDR48Q8TAF3 677 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 HEXDCQ8WVB3 486 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 KLHL6Q8WZ60 621 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 NCSTNQ92542 709 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 TFGQ92734 400 aaPredicted RBP6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 SLC41A2Q96JW4 573 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 RUNDC3BQ96NL0 473 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 SLC46A1Q96NT5 459 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 RUFY1Q96T51 708 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 GPR21Q99679 349 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 MAP3K3Q99759 626 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 CTRCQ99895 268 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 PITPNM3Q9BZ71 974 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 RAB33BQ9H082 229 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 KLHL25Q9H0H3 589 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 ZNF768Q9H5H4 540 aaKnown RBP6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 LRRC4CQ9HCJ2 640 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 NPHS2Q9NP85 383 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 INTS10Q9NVR2 710 aaKnown RBP6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 WHRNQ9P202 907 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 EPHA6Q9UF33 1036 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 GNPTGQ9UJJ9 305 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 ANAPC5Q9UJX4 755 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 ADAMTS6Q9UKP5 1117 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 ACSL6Q9UKU0 697 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 ACSL5Q9ULC5 683 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 SH2B3Q9UQQ2 575 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 KLHL20Q9Y2M5 609 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 B3GALT1Q9Y5Z6 326 aa6.98□□□□□ -1.29
TOPBP1-207ENST00000509162 TCRBV9S1A1TA0A576 114 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 OR6C74A6NCV1 312 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 TMEM8BA6NDV4 472 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 EFCAB7A8K855 629 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 H3BMM5 538 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 AP3B1O00203 1094 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 HGSO14964 777 aaPredicted RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 PRICKLE3O43900 615 aaPredicted RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 NDUFS3O75489 264 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 FAM155BO75949 473 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 MED26O95402 600 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 MATN4O95460 622 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 AHSGP02765 367 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 ESR1P03372 595 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 OR56A5P0C7T3 313 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 SLC2A4P14672 509 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 FOLR1P15328 257 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 UGT2B7P16662 529 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 VCLP18206 1134 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 ATF4P18848 351 aaPredicted RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 POLR2CP19387 275 aaPredicted RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 FDXRP22570 491 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 MSX1P28360 303 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 SLC5A2P31639 672 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 DNAJA1P31689 397 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 HALP42357 657 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 PAFAH1B1P43034 410 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 CD151P48509 253 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 CARSP49589 748 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 SEPHS1P49903 392 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 CSRP3P50461 194 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 TLE3Q04726 772 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 LAMB3Q13751 1172 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 FRG1Q14331 258 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 KYNUQ16719 465 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 DEFB110Q30KQ9 67 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 SYTL3Q4VX76 610 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 DNAJC21Q5F1R6 531 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 SAMD5Q5TGI4 173 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 LYPLAL1Q5VWZ2 237 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 PTRHD1Q6GMV3 140 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 MRNIPQ6NTE8 343 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 IRGCQ6NXR0 463 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 NXPE4Q6UWF7 544 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 VASH2Q86V25 355 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 LRRC6Q86X45 466 aa6.97□□□□□ -1.29
TOPBP1-207ENST00000509162 DTX1Q86Y01 620 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms