RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 FLT1P17948 1338 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 KDM3AQ9Y4C1 1321 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 GOLGA8IPA6NC78 632 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 ZSCAN5BA6NJL1 495 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 HNRNPCL2B2RXH8 293 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 RAB27BO00194 218 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 TAF4O00268 1085 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 ARHGEF9O43307 516 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 DAB1O75553 588 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 MYO1DO94832 1006 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 PTTG1O95997 202 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 APOA1P02647 267 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 IFNA16P05015 189 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 HMGN1P05114 100 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 KRT7P08729 469 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 UQCRFS1P1P0C7P4 283 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 MYL2P10916 166 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 UCHL3P15374 230 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 NAGAP17050 411 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 TCEA1P23193 301 aaKnown RBP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 CFL1P23528 166 aaKnown RBP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 TACR3P29371 465 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 CD40LGP29965 261 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 NTSR1P30989 418 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 MAGEA4P43358 317 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 NAMPTP43490 491 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 CBX5P45973 191 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 CPA2P48052 419 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 SLC9A3P48764 834 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 KLK7P49862 253 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 KRTAP10-6P60371 365 aaPredicted RBP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 YWHAGP61981 247 aaKnown RBP eCLIP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 PPP2R2BQ00005 443 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 MYBPC1Q00872 1141 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 RUNX1T1Q06455 604 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 BST2Q10589 180 aaKnown RBP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 SREBF2Q12772 1141 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 CETN1Q12798 172 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 ILF2Q12905 390 aaKnown RBP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 ITGADQ13349 1161 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 PSMD6Q15008 389 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 MORF4L2Q15014 288 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 CNN3Q15417 329 aaKnown RBP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 DUSP7Q16829 419 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 EXOC3L4Q17RC7 722 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 TYSND1Q2T9J0 566 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 LETM2Q2VYF4 491 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 PPM1LQ5SGD2 360 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 STXBP5Q5T5C0 1151 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF544Q6NX49 715 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 SHQ1Q6PI26 577 aaKnown RBP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 PLEKHG7Q6ZR37 379 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 RFPL4BQ6ZWI9 263 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF767PQ75MW2 155 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 GALNT7Q86SF2 657 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 PRPF39Q86UA1 669 aaKnown RBP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 CHERPQ8IWX8 916 aaKnown RBP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 LINC00469Q8N7U9 141 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 PRELID2Q8N945 189 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 BLOC1S5Q8TDH9 187 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 PPP4R1Q8TF05 950 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 CAPSLQ8WWF8 208 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 KRT35Q92764 455 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 SLC39A13Q96H72 371 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 TNIP3Q96KP6 325 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF597Q96LX8 424 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 GCNAQ96QF7 691 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 CIB1Q99828 191 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 SENP7Q9BQF6 1050 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 TRAF4Q9BUZ4 470 aaPredicted RBP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 SLC2A11Q9BYW1 496 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 FRMD8P1Q9BZ68 369 aaPredicted RBP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 DNAI2Q9GZS0 605 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 CLPBQ9H078 707 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 GANQ9H2C0 597 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 EPS8L2Q9H6S3 715 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 CXorf21Q9HAI6 301 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 SYTL2Q9HCH5 934 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 XAB2Q9HCS7 855 aaKnown RBP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 GJB4Q9NTQ9 266 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 SLC39A1Q9NY26 324 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 WWOXQ9NZC7 414 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 TBC1D14Q9P2M4 693 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 TBK1Q9UHD2 729 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 CDH22Q9UJ99 828 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 MID2Q9UJV3 735 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 PSME2Q9UL46 239 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 TMCC3Q9ULS5 477 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 VPS4AQ9UN37 437 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 SNX7Q9UNH6 387 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 KCNJ14Q9UNX9 436 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 EIF3LQ9Y262 564 aaKnown RBP4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 CFL2Q9Y281 166 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 HEG1Q9ULI3 1381 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 LAMB4A4D0S4 1761 aa4.5□□□□□ -1.69
PDLIM5-211ENST00000508531 PRUNE2Q8WUY3 3088 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 MYH11P35749 1972 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 SNED1Q8TER0 1413 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms