RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 CX3CL1P78423 397 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 TMF1P82094 1093 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 CDR2Q01850 454 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 KRT33BQ14525 404 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 RRS1Q15050 365 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 SLC1A5Q15758 541 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 MDH1BQ5I0G3 518 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 FAM114A1Q8IWE2 563 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 ZNF440Q8IYI8 595 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 MAPKAPK5-AS1Q8N8E1 139 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 SMARCAD1Q9H4L7 1026 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 TNS1Q9HBL0 1735 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 WSB2Q9NYS7 404 aaPredicted RBP4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 PLAGL1Q9UM63 463 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 RIPK3Q9Y572 518 aa4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.59□□□□□ -1.67
TOPBP1-206ENST00000508524 MYO5BQ9ULV0 1848 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 NALCNQ8IZF0 1738 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 XRN1Q8IZH2 1706 aaKnown RBP4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 DISP2A7MBM2 1401 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 NOS1P29475 1434 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 NINLQ9Y2I6 1382 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 GAPDHSO14556 408 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 VILLO15195 856 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 DCXO43602 365 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 PRKRAO75569 313 aaKnown RBP4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 SORBS2O94875 1100 aaKnown RBP4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 CAPN3P20807 821 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 SLC15A1P46059 708 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 SLC6A12P48065 614 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 SNX16P57768 344 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 LMO4P61968 165 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 TEAD2Q15562 447 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 CTU2Q2VPK5 515 aaKnown RBP4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 RAB41Q5JT25 222 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 PSRC1Q6PGN9 363 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 C1orf122Q6ZSJ8 110 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 HAUS6Q7Z4H7 955 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 LDB1Q86U70 411 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 PIGZQ86VD9 579 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 ZNF614Q8N883 585 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 KBTBD8Q8NFY9 601 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 FGFBP3Q8TAT2 258 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 ZFAND2BQ8WV99 257 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 VGLL1Q99990 258 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 PYGO2Q9BRQ0 406 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 SYT11Q9BT88 431 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 DPAGT1Q9H3H5 408 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 RNF186Q9NXI6 227 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 TAB2Q9NYJ8 693 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 HACL1Q9UJ83 578 aa4.58□□□□□ -1.68
TOPBP1-206ENST00000508524 EIF2AK4Q9P2K8 1649 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 C1orf167Q5SNV9 1468 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 FYCO1Q9BQS8 1478 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 ADGRL3Q9HAR2 1447 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 RIMS2Q9UQ26 1411 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 AGAP14A8MT82 685 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 AP3D1O14617 1153 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 KHDRBS3O75525 346 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 GPIP06744 558 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 ACSL1P33121 698 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 MAGEA11P43364 429 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 PNLIPRP2P54317 469 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 KRTAP10-3P60369 221 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 PRKCZQ05513 592 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 DMPKQ09013 629 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 ZNF613Q6PF04 617 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 TRIML1Q8N9V2 468 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 OR13J1Q8NGT2 312 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 OR2AJ1Q8NGZ0 328 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 OR4C3Q8NH37 302 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 SAT2Q96F10 170 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 CABLES2Q9BTV7 478 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 SPATC1LQ9H0A9 340 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 KCNK15Q9H427 330 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 ZNF701Q9NV72 531 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 SUCLA2Q9P2R7 463 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 ZDHHC2Q9UIJ5 367 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 MTUS1Q9ULD2 1270 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 ZNF148Q9UQR1 794 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 MARF1Q9Y4F3 1742 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 NRKQ7Z2Y5 1582 aa4.57□□□□□ -1.68
TOPBP1-206ENST00000508524 MTUS2Q5JR59 1369 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 NUP188Q5SRE5 1749 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 SHANK3Q9BYB0 1731 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 HYKKA2RU49 373 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 SIRPAP78324 504 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 HNRNPDQ14103 355 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 TAF13Q15543 124 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 FIGLAQ6QHK4 219 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 UNC5CLQ8IV45 518 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 CEP57L1Q8IYX8 460 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 DCLK2Q8N568 766 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 TEX19Q8NA77 164 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 PPFIBP2Q8ND30 876 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 C1orf131Q8NDD1 294 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 PAPD5Q8NDF8 572 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 MOSPD2Q8NHP6 518 aa4.56□□□□□ -1.68
TOPBP1-206ENST00000508524 C18orf12Q96KH6 178 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms