RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 DHCR7Q9UBM7 475 aaKnown RBP20.05■□□□□ 0.8
CLDND1-216ENST00000507944 G3BP2Q9UN86 482 aaKnown RBP20.05■□□□□ 0.8
CLDND1-216ENST00000507944 SRPK3Q9UPE1 567 aa20.05■□□□□ 0.8
CLDND1-216ENST00000507944 KLHL20Q9Y2M5 609 aa20.05■□□□□ 0.8
CLDND1-216ENST00000507944 MAST4O15021 2626 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 A6NL46 340 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 NDUFS3O75489 264 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 CCDC175P0C221 793 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 ATXN8OSP0DMR3 200 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 MAGP20916 626 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 OTX2P32243 289 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 SSPNQ14714 243 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 MPP5Q8N3R9 675 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 OR2L8Q8NGY9 312 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 GSDMBQ8TAX9 411 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 NDC1Q9BTX1 674 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 P2RY12Q9H244 342 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 TXLNGQ9NUQ3 528 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 EURLQ9NYK6 297 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.04■□□□□ 0.8
CLDND1-216ENST00000507944 IFT80Q9P2H3 777 aaPredicted RBP20.04■□□□□ 0.8
CLDND1-216ENST00000507944 GNPTGQ9UJJ9 305 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 SLC39A10Q9ULF5 831 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 PTRH2Q9Y3E5 179 aaKnown RBP20.04■□□□□ 0.8
CLDND1-216ENST00000507944 COL12A1Q99715 3063 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 CNTRLQ7Z7A1 2325 aa20.04■□□□□ 0.8
CLDND1-216ENST00000507944 PCM1Q15154 2024 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 CLEC18AA5D8T8 446 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 KPNA5O15131 536 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 S1PR4O95977 384 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 CD63P08962 238 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 RPS3P23396 243 aaKnown RBP eCLIP20.03■□□□□ 0.8
CLDND1-216ENST00000507944 MGAT1P26572 445 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 TTC23LQ6PF05 361 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 CLEC18BQ6UXF7 455 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 TAX1BP1Q86VP1 789 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 LRRC6Q86X45 466 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 MCATQ8IVS2 390 aaKnown RBP20.03■□□□□ 0.8
CLDND1-216ENST00000507944 CLEC18CQ8NCF0 446 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 IP6K3Q96PC2 410 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 KIFC1Q9BW19 673 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 NUDT9Q9BW91 350 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 ANKMY1Q9P2S6 941 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 NDOR1Q9UHB4 597 aa20.03■□□□□ 0.8
CLDND1-216ENST00000507944 SPTBN1Q01082 2364 aaKnown RBP20.03■□□□□ 0.8
CLDND1-216ENST00000507944 CEP104O60308 925 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 FOLR3P41439 243 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 CDK16Q00536 496 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 SLC9A5Q14940 896 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 SF1Q15637 639 aaKnown RBP20.02■□□□□ 0.8
CLDND1-216ENST00000507944 NKAIN1Q4KMZ8 207 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 LRRC8BQ6P9F7 803 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 CES3Q6UWW8 571 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 OTOAQ7RTW8 1153 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 OTUD6BQ8N6M0 293 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 EFCAB3Q8N7B9 438 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 TRIM58Q8NG06 486 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 CPT1CQ8TCG5 803 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 MRM3Q9HC36 420 aaKnown RBP20.02■□□□□ 0.8
CLDND1-216ENST00000507944 HOMER3Q9NSC5 361 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 INTS7Q9NVH2 962 aaKnown RBP20.02■□□□□ 0.8
CLDND1-216ENST00000507944 GPR83Q9NYM4 423 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 TTC7AQ9ULT0 858 aaPredicted RBP20.02■□□□□ 0.8
CLDND1-216ENST00000507944 SHANK1Q9Y566 2161 aa20.02■□□□□ 0.8
CLDND1-216ENST00000507944 USP9XQ93008 2570 aaPredicted RBP20.01■□□□□ 0.79
CLDND1-216ENST00000507944 SPTAN1Q13813 2472 aaKnown RBP20.01■□□□□ 0.79
CLDND1-216ENST00000507944 PCSK5Q92824 1860 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 RASGRF2O14827 1237 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 DPM1O60762 260 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 VAPBO95292 243 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 TPSB2P20231 275 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 ALAS2P22557 587 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 ARNTP27540 789 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 EIF3BP55884 814 aaKnown RBP20.01■□□□□ 0.79
CLDND1-216ENST00000507944 SRSF1Q07955 248 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLDND1-216ENST00000507944 TPSAB1Q15661 275 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 MRPL14Q6P1L8 145 aaKnown RBP20.01■□□□□ 0.79
CLDND1-216ENST00000507944 FIGLAQ6QHK4 219 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 MRGPREQ86SM8 312 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 SDCCAG8Q86SQ7 713 aaPredicted RBP20.01■□□□□ 0.79
CLDND1-216ENST00000507944 HPS6Q86YV9 775 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 FAM26EQ8N5C1 309 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 OR2Y1Q8NGV0 311 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 SKA2Q8WVK7 121 aaPredicted RBP20.01■□□□□ 0.79
CLDND1-216ENST00000507944 RAD51AP1Q96B01 352 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 PTERQ96BW5 349 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 MFSD3Q96ES6 412 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 SYBUQ9NX95 663 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 MRFAP1Q9Y605 127 aa20.01■□□□□ 0.79
CLDND1-216ENST00000507944 TCRBV7S3A2A0A539 114 aa20■□□□□ 0.79
CLDND1-216ENST00000507944 PEX12O00623 359 aa20■□□□□ 0.79
CLDND1-216ENST00000507944 CNOT3O75175 753 aaKnown RBP20■□□□□ 0.79
CLDND1-216ENST00000507944 VPS4BO75351 444 aa20■□□□□ 0.79
CLDND1-216ENST00000507944 C1orf105O95561 183 aa20■□□□□ 0.79
CLDND1-216ENST00000507944 CXCR5P32302 372 aa20■□□□□ 0.79
CLDND1-216ENST00000507944 GRIA3P42263 894 aa20■□□□□ 0.79
CLDND1-216ENST00000507944 ARSFP54793 590 aa20■□□□□ 0.79
CLDND1-216ENST00000507944 KCTD19Q17RG1 926 aaPredicted RBP20■□□□□ 0.79
CLDND1-216ENST00000507944 ZC3H12BQ5HYM0 836 aaKnown RBP20■□□□□ 0.79
CLDND1-216ENST00000507944 FCRL6Q6DN72 434 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms