RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	LATS2	Q9NRM7	1088 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	KLHL20	Q9Y2M5	609 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	MRFAP1	Q9Y605	127 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	IGSF10	Q6WRI0	2623 aa		13.66	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ZNF891	A8MT65	544 aa	Predicted RBP	13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	RAD51C	O43502	376 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CPNE3	O75131	537 aa	Known RBP	13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TCN2	P20062	427 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CYP2A7	P20853	494 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	F8A1	P23610	371 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CCNF	P41002	786 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PDIA2	Q13087	525 aa	Known RBP	13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	LY6D	Q14210	128 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SF1	Q15637	639 aa	Known RBP	13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ZIC1	Q15915	447 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SLC5A12	Q1EHB4	618 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	C16orf46	Q6P387	395 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	RAB42	Q8N4Z0	105 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	GIMAP7	Q8NHV1	300 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	MAGEC3	Q8TD91	643 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	STARD8	Q92502	1023 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CERS2	Q96G23	380 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TCTN2	Q96GX1	697 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	NDN	Q99608	321 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ARHGAP9	Q9BRR9	750 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	RAB11FIP5	Q9BXF6	653 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SLC7A5P2	Q9GIP4	190 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SYTL2	Q9HCH5	934 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SLC17A6	Q9P2U8	582 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SERTAD3	Q9UJW9	196 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	MED16	Q9Y2X0	877 aa		13.65	□□□□□ -0.22
CCHCR1-222	ENST00000507459	FAM187A	A6NFU0	413 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	HCRTR1	O43613	425 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	VPS26A	O75436	327 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	MATN4	O95460	622 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	MAG	P20916	626 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	ATP5D	P30049	168 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	ITGA1	P56199	1179 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	COL9A2	Q14055	689 aa	Predicted RBP	13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	TBR1	Q16650	682 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	TRMT10B	Q6PF06	316 aa	Known RBP	13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	MAATS1	Q7Z4T9	603 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	SLC38A9	Q8NBW4	561 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	CT55	Q8WUE5	264 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	KCNJ9	Q92806	393 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	INPP5D	Q92835	1189 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	MR1	Q95460	341 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	SLC22A18	Q96BI1	424 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	CLIP3	Q96DZ5	547 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	C16orf45	Q96MC5	204 aa	Predicted RBP	13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	WDR83	Q9BRX9	315 aa	Known RBP	13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	ERP44	Q9BS26	406 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	AARSD1	Q9BTE6	412 aa	Known RBP	13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	PLAC1	Q9HBJ0	212 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	IRAK4	Q9NWZ3	460 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	DHRS7	Q9Y394	339 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	COMMD10	Q9Y6G5	202 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	TEX264	Q9Y6I9	313 aa		13.64	□□□□□ -0.23
CCHCR1-222	ENST00000507459	SNRNP200	O75643	2136 aa	Known RBP	13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	ARHGEF33	A8MVX0	844 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459		E7EQ34	232 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	TP73	O15350	636 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	SYF2	O95926	243 aa	Known RBP	13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	AHSG	P02765	367 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	CAT	P04040	527 aa	Known RBP	13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	KLK3	P07288	261 aa	Predicted RBP	13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	ATXN8OS	P0DMR3	200 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	MCM3	P25205	808 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	GABRB3	P28472	473 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	CALCOCO2	Q13137	446 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	GPS2	Q13227	327 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	DNASE1L3	Q13609	305 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	TSTA3	Q13630	321 aa	Predicted RBP	13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	FASTKD3	Q14CZ7	662 aa	Known RBP	13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	LINC00303	Q3SY05	128 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	TEDDM1	Q5T9Z0	273 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	CPNE9	Q8IYJ1	553 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	GPR135	Q8IZ08	494 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	BBOF1	Q8ND07	529 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	FBXO36	Q8NEA4	188 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	OR9A1P	Q8NGU1	263 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	CD200R1	Q8TD46	325 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	DENND1A	Q8TEH3	1009 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	LRRC39	Q96DD0	335 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	RUFY1	Q96T51	708 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	TWSG1	Q9GZX9	223 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	SPRTN	Q9H040	489 aa	Predicted RBP	13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	ACTR5	Q9H9F9	607 aa	Predicted RBP	13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	TRMT6	Q9UJA5	497 aa	Known RBP	13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	KCND3	Q9UK17	655 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	PCDHB3	Q9Y5E6	796 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	ATM	Q13315	3056 aa		13.63	□□□□□ -0.23
CCHCR1-222	ENST00000507459	TK2	O00142	265 aa		13.62	□□□□□ -0.23
CCHCR1-222	ENST00000507459	MEN1	O00255	615 aa		13.62	□□□□□ -0.23
CCHCR1-222	ENST00000507459	NDC80	O14777	642 aa		13.62	□□□□□ -0.23

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