RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ARHGAP22Q7Z5H3 698 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 CMC1Q7Z7K0 106 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 B3GNT8Q7Z7M8 397 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 TDRPQ86YL5 185 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 OR2L8Q8NGY9 312 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 MTBPQ96DY7 904 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 PKP4Q99569 1192 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 NRTNQ99748 197 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 TRIM54Q9BYV2 358 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 ZMYND15Q9H091 742 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 SEMA6CQ9H3T2 930 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 XKR8Q9H6D3 395 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 SNX15Q9NRS6 342 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 TMEM9Q9P0T7 183 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 SEMA5BQ9P283 1151 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 PSMC3IPQ9P2W1 217 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 LNPEPQ9UIQ6 1025 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 ADAMTS6Q9UKP5 1117 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 PLAGL1Q9UM63 463 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 NOVA2Q9UNW9 492 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 PDE10AQ9Y233 779 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 ACOT9Q9Y305 439 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 CCDC88CQ9P219 2028 aa11.52□□□□□ -0.56
PDLIM5-208ENST00000504489 A0A087X1B8 175 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 A0A096LPK6 155 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 IQANK1A0A1B0GTG1 560 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 PIPSLA2A3N6 862 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 CCDC151A5D8V7 595 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 FAM149AA5PLN7 773 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 C2orf74A8MZ97 194 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 TRIM49D1C9J1S8 452 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 TOP3BO95985 862 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 C2P06681 752 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 CHRM5P08912 532 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 ENO2P09104 434 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 ANKRD34CP0C6C1 535 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 GFERP55789 205 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 AP1S2P56377 157 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 ATP6V0D1P61421 351 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 PPP1CAP62136 330 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 SHC2P98077 582 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 KIR2DS3Q14952 304 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 PHKG1Q16816 387 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 PHF19Q5T6S3 580 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 IRGCQ6NXR0 463 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 SBSNQ6UWP8 590 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 PRSS42Q7Z5A4 293 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 TBC1D1Q86TI0 1168 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 CARFQ8N187 725 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 LINC01555Q8NAE3 123 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 DENND1AQ8TEH3 1009 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 LIN37Q96GY3 246 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 CCDC74BQ96LY2 380 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 CCDC138Q96M89 665 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 TGM7Q96PF1 710 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 SCNM1Q9BWG6 230 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 STRADBQ9C0K7 418 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 ACTR10Q9NZ32 417 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 CTNNAL1Q9UBT7 734 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 CIDEBQ9UHD4 219 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 TLK1Q9UKI8 766 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 IKZF3Q9UKT9 509 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 POMT2Q9UKY4 750 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 NEUROG3Q9Y4Z2 214 aa11.52□□□□□ -0.57
PDLIM5-208ENST00000504489 SDK2Q58EX2 2172 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 CCDC187A0A096LP49 1063 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 CCDC189A1A4V9 331 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 KRT87PA6NCN2 255 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 TLCD2A6NGC4 264 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 ZNF839A8K0R7 811 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 CDC7O00311 574 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 HGSO14964 777 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 CTIFO43310 598 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 PRICKLE3O43900 615 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 ERLIN1O75477 346 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 SLC16A8O95907 504 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 SYF2O95926 243 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 MPOP05164 745 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 LTA4HP09960 611 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 HIST1H2AGP0C0S8 130 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 CD1DP15813 335 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 HIST1H2ADP20671 130 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 MPSTP25325 297 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 PRDX3P30048 256 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 PEBP1P30086 187 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 KPNA2P52292 529 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 PNLIPRP1P54315 467 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 DLG1Q12959 904 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 EIF3IQ13347 325 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 CSHL1Q14406 222 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 PPP1R3AQ16821 1122 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 TAF1BQ53T94 588 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 SNAP47Q5SQN1 464 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 ADAMTSL2Q86TH1 951 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 CENPLQ8N0S6 344 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 FLVCR1-AS1Q8TAF5 88 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 ZNF480Q8WV37 535 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 KLHL6Q8WZ60 621 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 KIAA1191Q96A73 305 aa11.51□□□□□ -0.57
PDLIM5-208ENST00000504489 SLC22A18Q96BI1 424 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms