RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 ARFGEF2Q9Y6D5 1785 aa5.41□□□□□ -1.54
NIPBL-203ENST00000503274 CACNA1SQ13698 1873 aa5.41□□□□□ -1.54
NIPBL-203ENST00000503274 ABCC12Q96J65 1359 aa5.41□□□□□ -1.54
NIPBL-203ENST00000503274 PRSS47A8MTI9 375 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 PRKNO60260 465 aaPredicted RBP5.4□□□□□ -1.54
NIPBL-203ENST00000503274 GPR137BO60478 399 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 AVILO75366 819 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 GCNT3O95395 438 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 PRSS1P07477 247 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 MT3P25713 68 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 ARSEP51690 589 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 KRTAP10-7P60409 375 aaPredicted RBP5.4□□□□□ -1.54
NIPBL-203ENST00000503274 GRAPQ13588 217 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 DEFB115Q30KQ5 88 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 KRTAP24-1Q3LI83 254 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 ALS2CLQ60I27 953 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 ZNF329Q86UD4 541 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 KLHDC9Q8NEP7 349 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 GRAPLQ8TC17 118 aaPredicted RBP5.4□□□□□ -1.54
NIPBL-203ENST00000503274 PAFAH2Q99487 392 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 KIFC3Q9BVG8 833 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 SPATC1LQ9H0A9 340 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 PPIL3Q9H2H8 161 aaKnown RBP5.4□□□□□ -1.54
NIPBL-203ENST00000503274 APOBEC3GQ9HC16 384 aaKnown RBP5.4□□□□□ -1.54
NIPBL-203ENST00000503274 MBNL1Q9NR56 388 aaKnown RBP5.4□□□□□ -1.54
NIPBL-203ENST00000503274 MIOSQ9NXC5 875 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 LARSQ9P2J5 1176 aaKnown RBP5.4□□□□□ -1.54
NIPBL-203ENST00000503274 ABT1Q9ULW3 272 aaKnown RBP5.4□□□□□ -1.54
NIPBL-203ENST00000503274 PCDHGB4Q9UN71 923 aa5.4□□□□□ -1.54
NIPBL-203ENST00000503274 PTRH2Q9Y3E5 179 aaKnown RBP5.4□□□□□ -1.54
NIPBL-203ENST00000503274 ZNF541Q9H0D2 1346 aa5.4□□□□□ -1.55
NIPBL-203ENST00000503274 TEX13DA0A0J9YY54 714 aaPredicted RBP5.39□□□□□ -1.55
NIPBL-203ENST00000503274 FAM72CH0Y354 149 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 LINC01565O15544 149 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 GRID2O43424 1007 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 LDLRP01130 860 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 ACTN2P35609 894 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 MAP2K1Q02750 393 aaPredicted RBP5.39□□□□□ -1.55
NIPBL-203ENST00000503274 DMP1Q13316 513 aaPredicted RBP5.39□□□□□ -1.55
NIPBL-203ENST00000503274 PCLAFQ15004 111 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 GCNT6Q5T4J0 391 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 FAM72AQ5TYM5 149 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 WDR78Q5VTH9 848 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 KRT79Q5XKE5 535 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 ADALQ6DHV7 355 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 FAM72DQ6L9T8 149 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 SLC27A1Q6PCB7 646 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 FAM72BQ86X60 149 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 RSRC1Q96IZ7 334 aaKnown RBP5.39□□□□□ -1.55
NIPBL-203ENST00000503274 ZNF354BQ96LW1 612 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 ZNF582Q96NG8 517 aaPredicted RBP5.39□□□□□ -1.55
NIPBL-203ENST00000503274 KCNK15Q9H427 330 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 SLA2Q9H6Q3 261 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 HHATLQ9HCP6 504 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 GIMAP4Q9NUV9 329 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 SLC38A7Q9NVC3 462 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 ZNF148Q9UQR1 794 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 JRKLQ9Y4A0 524 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 ABCC4O15439 1325 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 ASTN2O75129 1339 aaPredicted RBP5.39□□□□□ -1.55
NIPBL-203ENST00000503274 PASKQ96RG2 1323 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 CDHR2Q9BYE9 1310 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 CNTNAP1P78357 1384 aa5.39□□□□□ -1.55
NIPBL-203ENST00000503274 NOTCH4Q99466 2003 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 LOC100509620A0A075B734 347 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 SYNCRIPO60506 623 aaKnown RBP5.38□□□□□ -1.55
NIPBL-203ENST00000503274 ENTPD3O75355 529 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 TRIM21P19474 475 aaKnown RBP5.38□□□□□ -1.55
NIPBL-203ENST00000503274 TIMP3P35625 211 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 DCTP40126 519 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 EIF2DP41214 584 aaKnown RBP5.38□□□□□ -1.55
NIPBL-203ENST00000503274 EPS15P42566 896 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 NR2C2P49116 596 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 LINC01547P58512 204 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-203ENST00000503274 RPS8P62241 208 aaKnown RBP5.38□□□□□ -1.55
NIPBL-203ENST00000503274 PSMC6P62333 389 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 STK4Q13043 487 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 MELKQ14680 651 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 NTRK2Q16620 822 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 CCDC152Q4G0S7 254 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 KLC3Q6P597 504 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 HAUS6Q7Z4H7 955 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 LDB1Q86U70 411 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-203ENST00000503274 CCDC191Q8NCU4 936 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 ERLEC1Q96DZ1 483 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 STAMBPL1Q96FJ0 436 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 PRMT6Q96LA8 375 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-203ENST00000503274 FAM81BQ96LP2 452 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 PGLYRP2Q96PD5 576 aa5.38□□□□□ -1.55
NIPBL-203ENST00000503274 ZBTB20Q9HC78 741 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-203ENST00000503274 TO15178 435 aa5.37□□□□□ -1.55
NIPBL-203ENST00000503274 ADAMDEC1O15204 470 aa5.37□□□□□ -1.55
NIPBL-203ENST00000503274 KRT86O43790 486 aa5.37□□□□□ -1.55
NIPBL-203ENST00000503274 H1F0P07305 194 aaKnown RBP5.37□□□□□ -1.55
NIPBL-203ENST00000503274 ZNF853P0CG23 659 aa5.37□□□□□ -1.55
NIPBL-203ENST00000503274 VPREB1P12018 145 aa5.37□□□□□ -1.55
NIPBL-203ENST00000503274 MSH3P20585 1137 aa5.37□□□□□ -1.55
NIPBL-203ENST00000503274 RPS12P25398 132 aaKnown RBP5.37□□□□□ -1.55
NIPBL-203ENST00000503274 GMPSP49915 693 aaPredicted RBP5.37□□□□□ -1.55
NIPBL-203ENST00000503274 STAT2P52630 851 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms