RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 IL1RAPL1Q9NZN1 696 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 BFARQ9NZS9 450 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 GALPQ9UBC7 116 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 ANAPC5Q9UJX4 755 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 ZKSCAN5Q9Y2L8 839 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 PPP2R2CQ9Y2T4 447 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 A6NL46 340 aa15.64■□□□□ 0.09
SCLT1-204ENST00000503215 ZNF185O15231 689 aa15.64■□□□□ 0.09
SCLT1-204ENST00000503215 NDUFS3O75489 264 aa15.64■□□□□ 0.09
SCLT1-204ENST00000503215 TMEM63AO94886 807 aa15.64■□□□□ 0.09
SCLT1-204ENST00000503215 CD9P21926 228 aa15.64■□□□□ 0.09
SCLT1-204ENST00000503215 BDKRB1P46663 353 aa15.64■□□□□ 0.09
SCLT1-204ENST00000503215 TTPAP49638 278 aa15.64■□□□□ 0.09
SCLT1-204ENST00000503215 EIF3BP55884 814 aaKnown RBP15.64■□□□□ 0.09
SCLT1-204ENST00000503215 ATP1A4Q13733 1029 aa15.64■□□□□ 0.09
SCLT1-204ENST00000503215 NADK2Q4G0N4 442 aa15.64■□□□□ 0.09
SCLT1-204ENST00000503215 AARS2Q5JTZ9 985 aaKnown RBP15.64■□□□□ 0.09
SCLT1-204ENST00000503215 LRRC8BQ6P9F7 803 aa15.64■□□□□ 0.09
SCLT1-204ENST00000503215 BIRC8Q96P09 236 aa15.64■□□□□ 0.09
SCLT1-204ENST00000503215 SLC22A11Q9NSA0 550 aa15.64■□□□□ 0.09
SCLT1-204ENST00000503215 EURLQ9NYK6 297 aa15.64■□□□□ 0.09
SCLT1-204ENST00000503215 PTPN13Q12923 2485 aa15.64■□□□□ 0.09
SCLT1-204ENST00000503215 ZSCAN9O15535 394 aaPredicted RBP15.63■□□□□ 0.09
SCLT1-204ENST00000503215 PRICKLE3O43900 615 aaPredicted RBP15.63■□□□□ 0.09
SCLT1-204ENST00000503215 TPSB2P20231 275 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 ITGAXP20702 1163 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 AGXTP21549 392 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 MCM3P25205 808 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 FMO4P31512 558 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 OTX2P32243 289 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 PPARGP37231 505 aaPredicted RBP15.63■□□□□ 0.09
SCLT1-204ENST00000503215 PGDP52209 483 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 YBX1P67809 324 aaKnown RBP15.63■□□□□ 0.09
SCLT1-204ENST00000503215 SRSF1Q07955 248 aaKnown RBP eCLIP15.63■□□□□ 0.09
SCLT1-204ENST00000503215 KCNJ11Q14654 390 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 TPSAB1Q15661 275 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 FCRL6Q6DN72 434 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 RHBDD2Q6NTF9 364 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 UNC5DQ6UXZ4 953 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 C4orf22Q6V702 233 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 CAND1Q86VP6 1230 aaKnown RBP15.63■□□□□ 0.09
SCLT1-204ENST00000503215 MCATQ8IVS2 390 aaKnown RBP15.63■□□□□ 0.09
SCLT1-204ENST00000503215 DCUN1D3Q8IWE4 304 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 OTUD6BQ8N6M0 293 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 FDCSPQ8NFU4 85 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 TRIM58Q8NG06 486 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 OR2L8Q8NGY9 312 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 MAIP1Q8WWC4 291 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 MIB2Q96AX9 1013 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 TSSK1BQ9BXA7 367 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 SOX13Q9UN79 622 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 PLCL2Q9UPR0 1127 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 AP1M2Q9Y6Q5 423 aa15.63■□□□□ 0.09
SCLT1-204ENST00000503215 C9J4A7 227 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 F8W8V4 182 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 NRP2O60462 931 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 NIPSNAP2O75323 286 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 CEACAM4O75871 244 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 C1orf105O95561 183 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 HBQ1P09105 142 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 RPS3P23396 243 aaKnown RBP eCLIP15.62■□□□□ 0.09
SCLT1-204ENST00000503215 PSMB5P28074 263 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 GCGRP47871 477 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 GPS1Q13098 491 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 RAPSNQ13702 412 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 FIGLAQ6QHK4 219 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 DTWD1Q8N5C7 304 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 DENND1AQ8TEH3 1009 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 LPGAT1Q92604 370 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 ANP32BQ92688 251 aaKnown RBP15.62■□□□□ 0.09
SCLT1-204ENST00000503215 DPH2Q9BQC3 489 aaPredicted RBP15.62■□□□□ 0.09
SCLT1-204ENST00000503215 NUDT9Q9BW91 350 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 MRM3Q9HC36 420 aaKnown RBP15.62■□□□□ 0.09
SCLT1-204ENST00000503215 IRAK4Q9NWZ3 460 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 GNPTGQ9UJJ9 305 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 CRYL1Q9Y2S2 319 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 PTRH2Q9Y3E5 179 aaKnown RBP15.62■□□□□ 0.09
SCLT1-204ENST00000503215 PCDHGA9Q9Y5G4 932 aaKnown RBP15.62■□□□□ 0.09
SCLT1-204ENST00000503215 RASGRF2O14827 1237 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 KRT14P02533 472 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 DCDP81605 110 aaKnown RBP15.62■□□□□ 0.09
SCLT1-204ENST00000503215 TMED2Q15363 201 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 TYSND1Q2T9J0 566 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 NKAIN1Q4KMZ8 207 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 PAPD7Q5XG87 772 aaKnown RBP15.62■□□□□ 0.09
SCLT1-204ENST00000503215 TLDC1Q6P9B6 456 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 CNSTQ6PJW8 725 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 CENPUQ71F23 418 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 OTOAQ7RTW8 1153 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 AGGF1Q8N302 714 aaeCLIP15.62■□□□□ 0.09
SCLT1-204ENST00000503215 SKA2Q8WVK7 121 aaPredicted RBP15.62■□□□□ 0.09
SCLT1-204ENST00000503215 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.62■□□□□ 0.09
SCLT1-204ENST00000503215 PANX3Q96QZ0 392 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 LUZP4Q9P127 313 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.62■□□□□ 0.09
SCLT1-204ENST00000503215 SLC39A10Q9ULF5 831 aa15.62■□□□□ 0.09
SCLT1-204ENST00000503215 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.61■□□□□ 0.09
SCLT1-204ENST00000503215 GOLGA8MH3BSY2 632 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 CTSVO60911 334 aa15.61■□□□□ 0.09
SCLT1-204ENST00000503215 MED26O95402 600 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms