RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 GPR34Q9UPC5 381 aa2.17□□□□□ -2.06
SMAD1-203ENST00000502342 PPP1R3CQ9UQK1 317 aa2.17□□□□□ -2.06
SMAD1-203ENST00000502342 NME7Q9Y5B8 376 aa2.17□□□□□ -2.06
SMAD1-203ENST00000502342 LOC102723996A0A087X1L8 192 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 MSGN1A6NI15 193 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 MAGEC1O60732 1142 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 ZFAND5O76080 213 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 BEST1O76090 585 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 GFPT2O94808 682 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 CLDN1O95832 211 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 WDPCPO95876 746 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 GPIP06744 558 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 IGHV4-31P0DP07 118 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 HSPA8P11142 646 aaKnown RBP2.16□□□□□ -2.06
SMAD1-203ENST00000502342 PFKFB1P16118 471 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 PORP16435 677 aaPredicted RBP2.16□□□□□ -2.06
SMAD1-203ENST00000502342 CDH3P22223 829 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 PTPN3P26045 913 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 CSTF2P33240 577 aaKnown RBP eCLIP2.16□□□□□ -2.06
SMAD1-203ENST00000502342 ACTN2P35609 894 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 ZNF75DP51815 510 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 PAX9P55771 341 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 GCNT1Q02742 428 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 STK4Q13043 487 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 DRP2Q13474 957 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 LPAL2Q16609 132 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 TCTE1Q5JU00 501 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 HYIQ5T013 277 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 LCN1P1Q5VSP4 162 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 DOK6Q6PKX4 331 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 LRRTM1Q86UE6 522 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 ADIPOR2Q86V24 386 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 KIRREL3Q8IZU9 778 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 LYG1Q8N1E2 194 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 DCLK2Q8N568 766 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 MINDY1Q8N5J2 469 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 BMPERQ8N8U9 685 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 OR11H4Q8NGC9 324 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 OR5AP2Q8NGF4 316 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 VANGL1Q8TAA9 524 aaPredicted RBP2.16□□□□□ -2.06
SMAD1-203ENST00000502342 SSMEM1Q8WWF3 244 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 PRPF31Q8WWY3 499 aaKnown RBP2.16□□□□□ -2.06
SMAD1-203ENST00000502342 SYN2Q92777 582 aaPredicted RBP2.16□□□□□ -2.06
SMAD1-203ENST00000502342 SLAMF9Q96A28 289 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 NXNL1Q96CM4 212 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 SEPHS2Q99611 448 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 RAD9AQ99638 391 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 PYGO2Q9BRQ0 406 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 MXD3Q9BW11 206 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 PANK2Q9BZ23 570 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 UPF3AQ9H1J1 476 aaKnown RBP2.16□□□□□ -2.06
SMAD1-203ENST00000502342 CCDC68Q9H2F9 335 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 CPVLQ9H3G5 476 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 GOLPH3LQ9H4A5 285 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 RPS10P5Q9NQ39 176 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 SLC35C2Q9NQQ7 365 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.16□□□□□ -2.06
SMAD1-203ENST00000502342 ZNF701Q9NV72 531 aaPredicted RBP2.16□□□□□ -2.06
SMAD1-203ENST00000502342 ERAP1Q9NZ08 941 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 FBXO2Q9UK22 296 aaPredicted RBP2.16□□□□□ -2.06
SMAD1-203ENST00000502342 PADI2Q9Y2J8 665 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 ANGPTL3Q9Y5C1 460 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 SMAD5-AS1Q9Y6J3 95 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 PCDH11YQ9BZA8 1340 aa2.16□□□□□ -2.06
SMAD1-203ENST00000502342 COL2A1P02458 1487 aaPredicted RBP2.15□□□□□ -2.06
SMAD1-203ENST00000502342 C2orf81A6NN90 581 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 ENO4A6NNW6 628 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 OR10H2O60403 315 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 KHDRBS3O75525 346 aaKnown RBP2.15□□□□□ -2.07
SMAD1-203ENST00000502342 DARSP14868 501 aaKnown RBP2.15□□□□□ -2.07
SMAD1-203ENST00000502342 LHCGRP22888 699 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 MMP12P39900 470 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 MTHFRP42898 656 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 CCR10P46092 362 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 LBX1P52954 281 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 EIF5P55010 431 aaKnown RBP2.15□□□□□ -2.07
SMAD1-203ENST00000502342 MAZP56270 477 aaKnown RBP2.15□□□□□ -2.07
SMAD1-203ENST00000502342 ZNF415Q09FC8 603 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 LMOD3Q0VAK6 560 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 TAF10Q12962 218 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 HSPB3Q12988 150 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 BAATQ14032 418 aaPredicted RBP2.15□□□□□ -2.07
SMAD1-203ENST00000502342 SIM2Q14190 667 aaPredicted RBP2.15□□□□□ -2.07
SMAD1-203ENST00000502342 NECTIN1Q15223 517 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 MEA1Q16626 185 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 UGP2Q16851 508 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 CBWD6Q4V339 395 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 SYT14P1Q58G82 188 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 SLC25A53Q5H9E4 307 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 CBWD3Q5JTY5 395 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 LCE3CQ5T5A8 94 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 C6orf163Q5TEZ5 329 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 ZNF613Q6PF04 617 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 FIP1L1Q6UN15 594 aaKnown RBP2.15□□□□□ -2.07
SMAD1-203ENST00000502342 TMEM207Q6UWW9 146 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 ARHGAP22Q7Z5H3 698 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 TMPRSS11BQ86T26 416 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 NUDT13Q86X67 352 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 DNAAF5Q86Y56 855 aa2.15□□□□□ -2.07
SMAD1-203ENST00000502342 LGI2Q8N0V4 545 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms